RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 BHLHE22Q8NFJ8 381 aaPredicted RBP7.3□□□□□ -1.24
SKP1-211ENST00000523359 AARSD1Q9BTE6 412 aaKnown RBP7.3□□□□□ -1.24
SKP1-211ENST00000523359 FOXP3Q9BZS1 431 aa7.3□□□□□ -1.24
SKP1-211ENST00000523359 GPR55Q9Y2T6 319 aaPredicted RBP7.3□□□□□ -1.24
SKP1-211ENST00000523359 CD3EP07766 207 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 SYPP08247 313 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 RAC2P15153 192 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 POU4F1Q01851 419 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 HSP90AA2PQ14568 343 aaPredicted RBP7.29□□□□□ -1.24
SKP1-211ENST00000523359 YOD1Q5VVQ6 348 aaPredicted RBP7.29□□□□□ -1.24
SKP1-211ENST00000523359 NLGN1Q8N2Q7 840 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 JMYQ8N9B5 988 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 ZBTB38Q8NAP3 1195 aaPredicted RBP7.29□□□□□ -1.24
SKP1-211ENST00000523359 ABHD4Q8TB40 342 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 MCMBPQ9BTE3 642 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 NSUN3Q9H649 340 aaKnown RBP7.29□□□□□ -1.24
SKP1-211ENST00000523359 TMEM59LQ9UK28 342 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 TCFL5Q9UL49 500 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 PCDHA11Q9Y5I1 949 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 PTCH2Q9Y6C5 1203 aa7.29□□□□□ -1.24
SKP1-211ENST00000523359 TRAV20A0A0B4J274 112 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 SSU72P8A0A1W2PR75 194 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 STXBP3O00186 592 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 FKTNO75072 461 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 VAV1P15498 845 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 BMP8BP34820 402 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 PCBP3P57721 371 aaKnown RBP7.28□□□□□ -1.24
SKP1-211ENST00000523359 EGR3Q06889 387 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 SQSTM1Q13501 440 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 FOXB2Q5VYV0 432 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 SDE2Q6IQ49 451 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 CILP2Q8IUL8 1156 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 PPP1R16BQ96T49 567 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 ADAMTS10Q9H324 1103 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 KCNK12Q9HB15 430 aa7.28□□□□□ -1.24
SKP1-211ENST00000523359 ESYT3A0FGR9 886 aa7.27□□□□□ -1.25
SKP1-211ENST00000523359 TSPAN15O95858 294 aa7.27□□□□□ -1.25
SKP1-211ENST00000523359 CAPNS1P04632 268 aa7.27□□□□□ -1.25
SKP1-211ENST00000523359 IFNGR1P15260 489 aa7.27□□□□□ -1.25
SKP1-211ENST00000523359 SF1Q15637 639 aaKnown RBP7.27□□□□□ -1.25
SKP1-211ENST00000523359 FBLN7Q53RD9 439 aa7.27□□□□□ -1.25
SKP1-211ENST00000523359 LINC00116Q8NCU8 138 aa7.27□□□□□ -1.25
SKP1-211ENST00000523359 FCRL3Q96P31 734 aaPredicted RBP7.27□□□□□ -1.25
SKP1-211ENST00000523359 SLC12A9Q9BXP2 914 aa7.27□□□□□ -1.25
SKP1-211ENST00000523359 NKX2-4Q9H2Z4 354 aa7.27□□□□□ -1.25
SKP1-211ENST00000523359 PRODHO43272 600 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 EIF5BO60841 1220 aaKnown RBP7.26□□□□□ -1.25
SKP1-211ENST00000523359 ZNF205O95201 554 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 SNRPB2P08579 225 aaKnown RBP7.26□□□□□ -1.25
SKP1-211ENST00000523359 GSTM1P09488 218 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 TRHRP34981 398 aaPredicted RBP7.26□□□□□ -1.25
SKP1-211ENST00000523359 NOP2P46087 812 aaKnown RBP7.26□□□□□ -1.25
SKP1-211ENST00000523359 TEKQ02763 1124 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 SCRN1Q12765 414 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 RTP2Q5QGT7 225 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 ZPBP2Q6X784 338 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 RNF111Q6ZNA4 994 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 FBXO15Q8NCQ5 510 aaPredicted RBP7.26□□□□□ -1.25
SKP1-211ENST00000523359 ZSWIM2Q8NEG5 633 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 MYLIPQ8WY64 445 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 EXOC2Q96KP1 924 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 CDC6Q99741 560 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 IER2Q9BTL4 223 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 AP5S1Q9NUS5 200 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 TMEM260Q9NX78 707 aa7.26□□□□□ -1.25
SKP1-211ENST00000523359 AURKAO14965 403 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 C1QTNF9P0C862 333 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 FGFR1P11362 822 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 RPL10P27635 214 aaKnown RBP7.25□□□□□ -1.25
SKP1-211ENST00000523359 CFPP27918 469 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 HOXC12P31275 282 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 L1CAMP32004 1257 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 KCNJ6P48051 423 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 CYP4F3Q08477 520 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 LONRF2Q1L5Z9 754 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 FAM209AQ5JX71 171 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 TOX2Q96NM4 488 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 CYP26B1Q9NR63 512 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 FANCLQ9NW38 375 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 BACE2Q9Y5Z0 518 aa7.25□□□□□ -1.25
SKP1-211ENST00000523359 CADPSQ9ULU8 1353 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 HPXP02790 462 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 KRT1P04264 644 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 PABPC1P11940 636 aaKnown RBP7.24□□□□□ -1.25
SKP1-211ENST00000523359 ECI1P42126 302 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 GFRA1P56159 465 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 PRSS53Q2L4Q9 553 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 NSMFQ6X4W1 530 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 WAPLQ7Z5K2 1190 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 ANKLE2Q86XL3 938 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 OSBP2Q969R2 916 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 SLC26A8Q96RN1 970 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 CDADC1Q9BWV3 514 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 EPB41L4BQ9H329 900 aa7.24□□□□□ -1.25
SKP1-211ENST00000523359 DCP1AQ9NPI6 582 aaPredicted RBP7.24□□□□□ -1.25
SKP1-211ENST00000523359 TRBV23-1A0A0A0MS06 115 aa7.23□□□□□ -1.25
SKP1-211ENST00000523359 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
SKP1-211ENST00000523359 C2orf71A6NGG8 1288 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms