RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ACRP10323 421 aa18.25■□□□□ 0.51
MRPS28-209ENST00000522987 CST5P28325 142 aaPredicted RBP18.25■□□□□ 0.51
MRPS28-209ENST00000522987 CXCL17Q6UXB2 119 aa18.25■□□□□ 0.51
MRPS28-209ENST00000522987 PCSK9Q8NBP7 692 aaKnown RBP18.25■□□□□ 0.51
MRPS28-209ENST00000522987 MAFAQ8NHW3 353 aaPredicted RBP18.25■□□□□ 0.51
MRPS28-209ENST00000522987 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.25■□□□□ 0.51
MRPS28-209ENST00000522987 COL25A1Q9BXS0 654 aaPredicted RBP18.25■□□□□ 0.51
MRPS28-209ENST00000522987 TBX21Q9UL17 535 aa18.25■□□□□ 0.51
MRPS28-209ENST00000522987 A0A0U1RQG5 324 aaPredicted RBP18.24■□□□□ 0.51
MRPS28-209ENST00000522987 GRXCR1A8MXD5 290 aa18.24■□□□□ 0.51
MRPS28-209ENST00000522987 TIMP1P01033 207 aa18.24■□□□□ 0.51
MRPS28-209ENST00000522987 PDE1AP54750 535 aa18.24■□□□□ 0.51
MRPS28-209ENST00000522987 TLK2Q86UE8 772 aa18.24■□□□□ 0.51
MRPS28-209ENST00000522987 EVI5LQ96CN4 794 aa18.24■□□□□ 0.51
MRPS28-209ENST00000522987 TOX2Q96NM4 488 aa18.24■□□□□ 0.51
MRPS28-209ENST00000522987 UNC80Q8N2C7 3258 aa18.24■□□□□ 0.51
MRPS28-209ENST00000522987 ELP1O95163 1332 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 SCN5AQ14524 2016 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 EYSQ5T1H1 3165 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 ARVCFO00192 962 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 DYNC1LI2O43237 492 aaPredicted RBP18.23■□□□□ 0.51
MRPS28-209ENST00000522987 FDX1P10109 184 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 FOSL2P15408 326 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 CSF2RAP15509 400 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 CYP2C18P33260 490 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 CDK7P50613 346 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 NMIQ13287 307 aaPredicted RBP18.23■□□□□ 0.51
MRPS28-209ENST00000522987 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
MRPS28-209ENST00000522987 LNPKQ9C0E8 428 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 CYP39A1Q9NYL5 469 aa18.23■□□□□ 0.51
MRPS28-209ENST00000522987 ASB14A6NK59 587 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 FGAP02671 866 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 SMPD1P17405 629 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 DNAJB2P25686 324 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 PSMC6P62333 389 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 TKFCQ3LXA3 575 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 MFSD5Q6N075 450 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 C16orf59Q7L2K0 433 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 FAM126BQ8IXS8 530 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 AP5M1Q9H0R1 490 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 UMODL1Q5DID0 1318 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 MROH7Q68CQ1 1323 aa18.22■□□□□ 0.51
MRPS28-209ENST00000522987 LAMA4Q16363 1823 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 NFIBO00712 420 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 TLR3O15455 904 aaKnown RBP18.21■□□□□ 0.51
MRPS28-209ENST00000522987 PBX2P40425 430 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 BAATQ14032 418 aaPredicted RBP18.21■□□□□ 0.51
MRPS28-209ENST00000522987 GRIN2CQ14957 1233 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 SYDE2Q5VT97 1194 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 PPP1R13LQ8WUF5 828 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 DCAF4Q8WV16 495 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
MRPS28-209ENST00000522987 TMEM47Q9BQJ4 181 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 HELLSQ9NRZ9 838 aa18.21■□□□□ 0.51
MRPS28-209ENST00000522987 GNEQ9Y223 722 aaKnown RBP18.21■□□□□ 0.51
MRPS28-209ENST00000522987 PTPDC1A2A3K4 754 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 ORC4O43929 436 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 PPIGQ13427 754 aaKnown RBP eCLIP18.2■□□□□ 0.5
MRPS28-209ENST00000522987 FSCN1Q16658 493 aaKnown RBP18.2■□□□□ 0.5
MRPS28-209ENST00000522987 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 PPP4R3BQ5MIZ7 849 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 TMEM240Q5SV17 173 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 TAPT1Q6NXT6 567 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 SLC30A10Q6XR72 485 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 KIAA1211Q6ZU35 1233 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 ZNF365Q70YC5 407 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 ZKSCAN3Q9BRR0 538 aa18.2■□□□□ 0.5
MRPS28-209ENST00000522987 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.19■□□□□ 0.5
MRPS28-209ENST00000522987 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.19■□□□□ 0.5
MRPS28-209ENST00000522987 PLA2G6O60733 806 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 ICAM1P05362 532 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 HSPD1P10809 573 aaKnown RBP18.19■□□□□ 0.5
MRPS28-209ENST00000522987 CALML3P27482 149 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 CCL23P55773 120 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 ITGA7Q13683 1181 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 ALX1Q15699 326 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 TRPV6Q9H1D0 765 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 RANBP17Q9H2T7 1088 aaKnown RBP18.19■□□□□ 0.5
MRPS28-209ENST00000522987 CPVLQ9H3G5 476 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 GRIN2DO15399 1336 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 PRUNE2Q8WUY3 3088 aa18.19■□□□□ 0.5
MRPS28-209ENST00000522987 TRIP12Q14669 1992 aaPredicted RBP18.19■□□□□ 0.5
MRPS28-209ENST00000522987 TOP1P11387 765 aaKnown RBP18.18■□□□□ 0.5
MRPS28-209ENST00000522987 TBC1D10CQ8IV04 446 aa18.18■□□□□ 0.5
MRPS28-209ENST00000522987 TMEM199Q8N511 208 aa18.18■□□□□ 0.5
MRPS28-209ENST00000522987 PPM1EQ8WY54 764 aa18.18■□□□□ 0.5
MRPS28-209ENST00000522987 TIFAQ96CG3 184 aa18.18■□□□□ 0.5
MRPS28-209ENST00000522987 MYH7BA7E2Y1 1941 aa18.17■□□□□ 0.5
MRPS28-209ENST00000522987 CD4P01730 458 aa18.17■□□□□ 0.5
MRPS28-209ENST00000522987 GOLGA8HP0CJ92 632 aa18.17■□□□□ 0.5
MRPS28-209ENST00000522987 ALDH5A1P51649 535 aaPredicted RBP18.17■□□□□ 0.5
MRPS28-209ENST00000522987 HIPK3Q9H422 1215 aa18.17■□□□□ 0.5
MRPS28-209ENST00000522987 ZNF576Q9H609 170 aa18.17■□□□□ 0.5
MRPS28-209ENST00000522987 NEDD4P46934 1319 aa18.17■□□□□ 0.5
MRPS28-209ENST00000522987 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
MRPS28-209ENST00000522987 KIAA1217Q5T5P2 1943 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms