RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
SPIDR-215ENST00000521798 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
SPIDR-215ENST00000521798 LRP2BPQ9P2M1 347 aa9.2□□□□□ -0.94
SPIDR-215ENST00000521798 TJP2Q9UDY2 1190 aa9.2□□□□□ -0.94
SPIDR-215ENST00000521798 SFMBT1Q9UHJ3 866 aa9.2□□□□□ -0.94
SPIDR-215ENST00000521798 HIF3AQ9Y2N7 669 aa9.2□□□□□ -0.94
SPIDR-215ENST00000521798 BRD4O60885 1362 aaPredicted RBP9.2□□□□□ -0.94
SPIDR-215ENST00000521798 ELOA3CA0A087WX78 387 aaPredicted RBP9.19□□□□□ -0.94
SPIDR-215ENST00000521798 CDC14CA4D256 554 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 ELOA3DA6NLF2 546 aaPredicted RBP9.19□□□□□ -0.94
SPIDR-215ENST00000521798 KATNA1O75449 491 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 DNAJC8O75937 253 aaPredicted RBP9.19□□□□□ -0.94
SPIDR-215ENST00000521798 CAPNS1P04632 268 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 ITGAVP06756 1048 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 HSPA5P11021 654 aaKnown RBP9.19□□□□□ -0.94
SPIDR-215ENST00000521798 TMF1P82094 1093 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 ELOA3BQ3SY89 546 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 TDRD10Q5VZ19 366 aaKnown RBP9.19□□□□□ -0.94
SPIDR-215ENST00000521798 HEATR6Q6AI08 1181 aaKnown RBP9.19□□□□□ -0.94
SPIDR-215ENST00000521798 AHI1Q8N157 1196 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 ELOA3Q8NG57 546 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 NUDT8Q8WV74 236 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 TMEM87BQ96K49 555 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 KLHL25Q9H0H3 589 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 FAM86C1Q9NVL1 165 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 AFF2P51816 1311 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 ABCA3Q99758 1704 aa9.19□□□□□ -0.94
SPIDR-215ENST00000521798 UBOX5O94941 541 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 NPTXRO95502 500 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 TP53P04637 393 aaPredicted RBP9.18□□□□□ -0.94
SPIDR-215ENST00000521798 PABPC1P11940 636 aaKnown RBP9.18□□□□□ -0.94
SPIDR-215ENST00000521798 POU3F2P20265 443 aaPredicted RBP9.18□□□□□ -0.94
SPIDR-215ENST00000521798 ERVK-24P63145 666 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 NUTM2GQ5VZR2 741 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 ZNF772Q68DY9 489 aaPredicted RBP9.18□□□□□ -0.94
SPIDR-215ENST00000521798 MRPL41Q8IXM3 137 aaKnown RBP9.18□□□□□ -0.94
SPIDR-215ENST00000521798 ZNF513Q8N8E2 541 aaPredicted RBP9.18□□□□□ -0.94
SPIDR-215ENST00000521798 LRRN4CLQ8ND94 238 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 LEO1Q8WVC0 666 aaPredicted RBP9.18□□□□□ -0.94
SPIDR-215ENST00000521798 WDR18Q9BV38 432 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 TRIM39Q9HCM9 518 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 APEX2Q9UBZ4 518 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
SPIDR-215ENST00000521798 AKAP12Q02952 1782 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 NRKQ7Z2Y5 1582 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 A0A1W2PP64 1363 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 KTN1Q86UP2 1357 aaKnown RBP9.17□□□□□ -0.94
SPIDR-215ENST00000521798 NINLQ9Y2I6 1382 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 USP19O94966 1318 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 TTC21BQ7Z4L5 1316 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 SYNGAP1Q96PV0 1343 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 SHTN1A0MZ66 631 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 C9IYK1 514 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 FANCGO15287 622 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 PRODHO43272 600 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 CBFA2T2O43439 604 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 SCGB1D2O95969 90 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 SLFN14P0C7P3 912 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 MX2P20592 715 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 NEK2P51955 445 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 ZBTB37Q5TC79 503 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 SLC6A19Q695T7 634 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 NSMFQ6X4W1 530 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 OSBP2Q969R2 916 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 CARD10Q9BWT7 1032 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 AAASQ9NRG9 546 aa9.17□□□□□ -0.94
SPIDR-215ENST00000521798 GDF2Q9UK05 429 aaPredicted RBP9.17□□□□□ -0.94
SPIDR-215ENST00000521798 MARF1Q9Y4F3 1742 aaKnown RBP9.17□□□□□ -0.94
SPIDR-215ENST00000521798 SLIT2O94813 1529 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 BCL9LQ86UU0 1499 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 LOC100289279A0A1B0GTE1 492 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 STRN3Q13033 797 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 LRRC41Q15345 812 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 DHCR24Q15392 516 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 PPM1JQ5JR12 505 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 RNF219Q5W0B1 726 aaPredicted RBP9.16□□□□□ -0.94
SPIDR-215ENST00000521798 SV2AQ7L0J3 742 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 KLHL23Q8NBE8 558 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 WDR66Q8TBY9 1149 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 PPP1R14AQ96A00 147 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 KLHDC7BQ96G42 594 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 CCDC74BQ96LY2 380 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 USP26Q9BXU7 913 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 SENP2Q9HC62 589 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 JPH1Q9HDC5 661 aaPredicted RBP9.16□□□□□ -0.94
SPIDR-215ENST00000521798 SLC5A4Q9NY91 659 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 MON2Q7Z3U7 1717 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 PIK3C2AO00443 1686 aa9.16□□□□□ -0.94
SPIDR-215ENST00000521798 PHRF1Q9P1Y6 1649 aaKnown RBP9.16□□□□□ -0.94
SPIDR-215ENST00000521798 TTC21AQ8NDW8 1320 aa9.15□□□□□ -0.94
SPIDR-215ENST00000521798 NEURL1BA8MQ27 555 aa9.15□□□□□ -0.94
SPIDR-215ENST00000521798 TM4SF5O14894 197 aa9.15□□□□□ -0.94
SPIDR-215ENST00000521798 ST8SIA5O15466 376 aa9.15□□□□□ -0.94
SPIDR-215ENST00000521798 AOC2O75106 756 aa9.15□□□□□ -0.94
SPIDR-215ENST00000521798 CAND2O75155 1236 aa9.15□□□□□ -0.94
SPIDR-215ENST00000521798 CLEC3AO75596 197 aa9.15□□□□□ -0.94
SPIDR-215ENST00000521798 C6orf222P0C671 652 aaPredicted RBP9.15□□□□□ -0.94
SPIDR-215ENST00000521798 GRIA2P42262 883 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms