RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 PPP1R12AO14974 1030 aaPredicted RBP9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 LTKP29376 864 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 CD96P40200 585 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 SCRN1Q12765 414 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 TKFCQ3LXA3 575 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 CBLL1Q75N03 491 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 COPS5Q92905 334 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 SLKQ9H2G2 1235 aaPredicted RBP9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 PCDHA11Q9Y5I1 949 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 BACE2Q9Y5Z0 518 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 C2orf71A6NGG8 1288 aa9.54□□□□□ -0.88
NUDCD1-204ENST00000521439 ESR1P03372 595 aa9.54□□□□□ -0.88
NUDCD1-204ENST00000521439 IFNGR1P15260 489 aa9.54□□□□□ -0.88
NUDCD1-204ENST00000521439 TAL1P17542 331 aaPredicted RBP9.54□□□□□ -0.88
NUDCD1-204ENST00000521439 ECI1P42126 302 aa9.54□□□□□ -0.88
NUDCD1-204ENST00000521439 CYP4F3Q08477 520 aa9.54□□□□□ -0.88
NUDCD1-204ENST00000521439 TMEM145Q8NBT3 493 aa9.54□□□□□ -0.88
NUDCD1-204ENST00000521439 NCOA5Q9HCD5 579 aaKnown RBP9.54□□□□□ -0.88
NUDCD1-204ENST00000521439 GSTM1P09488 218 aa9.53□□□□□ -0.88
NUDCD1-204ENST00000521439 IKZF1Q13422 519 aa9.53□□□□□ -0.88
NUDCD1-204ENST00000521439 ZNF792Q3KQV3 632 aa9.53□□□□□ -0.88
NUDCD1-204ENST00000521439 RTP2Q5QGT7 225 aa9.53□□□□□ -0.88
NUDCD1-204ENST00000521439 SLC35F1Q5T1Q4 408 aa9.53□□□□□ -0.88
NUDCD1-204ENST00000521439 C1orf159Q96HA4 380 aa9.53□□□□□ -0.88
NUDCD1-204ENST00000521439 CD2APQ9Y5K6 639 aa9.53□□□□□ -0.88
NUDCD1-204ENST00000521439 PLD2O14939 933 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 THBDP07204 575 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 ENDOUP21128 410 aaKnown RBP9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 SEPHS1P49903 392 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 GYS2P54840 703 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 EGR3Q06889 387 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 PRSS53Q2L4Q9 553 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 TAF7LQ5H9L4 462 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 RCSD1Q6JBY9 416 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 KREMEN2Q8NCW0 462 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 PI4K2BQ8TCG2 481 aa9.52□□□□□ -0.89
NUDCD1-204ENST00000521439 ANKRD62A6NC57 917 aa9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 FKTNO75072 461 aa9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 TEKQ02763 1124 aa9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 CBX2Q14781 532 aaPredicted RBP9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 FNDC3BQ53EP0 1204 aaKnown RBP9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 EEF1DP3Q658K8 133 aa9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 MRPL4Q9BYD3 311 aaKnown RBP9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 GPRC5CQ9NQ84 441 aa9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 AP5S1Q9NUS5 200 aa9.51□□□□□ -0.89
NUDCD1-204ENST00000521439 RFPL3O75679 317 aa9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 C6orf222P0C671 652 aaPredicted RBP9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 NTRK3Q16288 839 aa9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 DALRD3Q5D0E6 543 aaKnown RBP9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 SLC23A3Q6PIS1 610 aa9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 KSR1Q8IVT5 923 aa9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 NPLOC4Q8TAT6 608 aa9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 FRS2Q8WU20 508 aa9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 CDADC1Q9BWV3 514 aa9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 PLAAQ9Y263 795 aa9.5□□□□□ -0.89
NUDCD1-204ENST00000521439 TMEM82A0PJX8 343 aa9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 RAPGEF3O95398 923 aa9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 RPL10P27635 214 aaKnown RBP9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 GABREP78334 506 aa9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 ZP2Q05996 745 aa9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 PABPC4Q13310 644 aaKnown RBP eCLIP9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 DENND5AQ6IQ26 1287 aa9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 USP53Q70EK8 1073 aa9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 RC3H2Q9HBD1 1191 aaKnown RBP9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 LMCD1Q9NZU5 365 aa9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 ZNF281Q9Y2X9 895 aa9.49□□□□□ -0.89
NUDCD1-204ENST00000521439 BLACEA4D250 179 aa9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 FGF10O15520 208 aaPredicted RBP9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 EIF5BO60841 1220 aaKnown RBP9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 RNASE1P07998 156 aaKnown RBP9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 ACBD5Q5T8D3 534 aaPredicted RBP9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 WAPLQ7Z5K2 1190 aa9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 PPIL6Q8IXY8 311 aa9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 PTPRN2Q92932 1015 aa9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 NINJ1Q92982 152 aa9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 MBNL3Q9NUK0 354 aaKnown RBP9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 ADAMTS6Q9UKP5 1117 aa9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 PRKAB1Q9Y478 270 aa9.48□□□□□ -0.89
NUDCD1-204ENST00000521439 MEFVO15553 781 aaPredicted RBP9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 PAX4O43316 350 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 PLS3P13797 630 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 NCLP19338 710 aaKnown RBP9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 TESK1Q15569 626 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 TRIM61Q5EBN2 209 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 RNF187Q5TA31 235 aaPredicted RBP9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 E4F1Q66K89 784 aaPredicted RBP9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 ZPBP2Q6X784 338 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 DCAF4Q8WV16 495 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 PTCHD1Q96NR3 888 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 CLUHP3Q96NS8 147 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 TMX1Q9H3N1 280 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 CARS2Q9HA77 564 aaKnown RBP9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 CLEC1BQ9P126 229 aa9.47□□□□□ -0.89
NUDCD1-204ENST00000521439 TRBV23OR9-2A0A075B6M9 112 aa9.46□□□□□ -0.9
NUDCD1-204ENST00000521439 BIN1O00499 593 aa9.46□□□□□ -0.9
NUDCD1-204ENST00000521439 KCNQ2O43526 872 aa9.46□□□□□ -0.9
NUDCD1-204ENST00000521439 EFCAB14O75071 495 aa9.46□□□□□ -0.9
NUDCD1-204ENST00000521439 JUNBP17275 347 aaPredicted RBP9.46□□□□□ -0.9
NUDCD1-204ENST00000521439 ITGB5P18084 799 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms