RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 TET1Q8NFU7 2136 aa10.68□□□□□ -0.7
MRPS28-207ENST00000521434 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.74e-8■■■□□ 15.6
MRPS28-207ENST00000521434 HLA-CQ95604 372 aa10.68□□□□□ -0.7
MRPS28-207ENST00000521434 VWCEQ96DN2 955 aa10.68□□□□□ -0.7
MRPS28-207ENST00000521434 NUP88Q99567 741 aaPredicted RBP10.68□□□□□ -0.7
MRPS28-207ENST00000521434 KATNBL1Q9H079 304 aa10.68□□□□□ -0.7
MRPS28-207ENST00000521434 TRPV6Q9H1D0 765 aa10.68□□□□□ -0.7
MRPS28-207ENST00000521434 C1orf115Q9H7X2 142 aa10.68□□□□□ -0.7
MRPS28-207ENST00000521434 ARMT1Q9H993 441 aa10.68□□□□□ -0.7
MRPS28-207ENST00000521434 ASTN1O14525 1302 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 CYP2D7A0A087X1C5 515 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 FAM86C2PA6NEL3 165 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 USP17L21D6R901 530 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 SMIM22K7EJ46 135 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 PRKAB2O43741 272 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 ZBED4O75132 1171 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 PFKMP08237 780 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 TNFAIP2Q03169 654 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 FSCN1Q16658 493 aaKnown RBP10.67□□□□□ -0.7
MRPS28-207ENST00000521434 KRT40Q6A162 431 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 TLK2Q86UE8 772 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 ALYREFQ86V81 257 aaKnown RBP10.67□□□□□ -0.7
MRPS28-207ENST00000521434 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 SCLYQ96I15 445 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 AGBL1Q96MI9 1066 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 CERS4Q9HA82 394 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 FBXO40Q9UH90 709 aa10.67□□□□□ -0.7
MRPS28-207ENST00000521434 CTDP1Q9Y5B0 961 aaPredicted RBP10.67□□□□□ -0.7
MRPS28-207ENST00000521434 TRIP12Q14669 1992 aaPredicted RBP10.66□□□□□ -0.7
MRPS28-207ENST00000521434 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
MRPS28-207ENST00000521434 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.66□□□□□ -0.7
MRPS28-207ENST00000521434 EPOPA6NHQ4 379 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 F5H6K3 240 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 PI4K2BG5E9Z4 385 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 GOLIM4O00461 696 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 ZEB2O60315 1214 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 MBD4O95243 580 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 KLRC3Q07444 240 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 TTLL4Q14679 1199 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 CHST13Q8NET6 341 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 ARNTL2Q8WYA1 636 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
MRPS28-207ENST00000521434 AP5M1Q9H0R1 490 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 SLC38A10Q9HBR0 1119 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 RAVER2Q9HCJ3 691 aaKnown RBP10.66□□□□□ -0.7
MRPS28-207ENST00000521434 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
MRPS28-207ENST00000521434 TANC1Q9C0D5 1861 aa10.66□□□□□ -0.7
MRPS28-207ENST00000521434 PTPRSQ13332 1948 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 STK25O00506 426 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
MRPS28-207ENST00000521434 NDUFB10O96000 172 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 ACTN1P12814 892 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 OAZ1P54368 228 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 CNTN2Q02246 1040 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 TAP1Q03518 808 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.7
MRPS28-207ENST00000521434 FAM133AQ8N9E0 248 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 PHOSPHO2Q8TCD6 241 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.65□□□□□ -0.7
MRPS28-207ENST00000521434 SLC9A7Q96T83 725 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 DNAJC2Q99543 621 aaKnown RBP10.65□□□□□ -0.7
MRPS28-207ENST00000521434 ALDH8A1Q9H2A2 487 aaPredicted RBP10.65□□□□□ -0.7
MRPS28-207ENST00000521434 NYAP2Q9P242 653 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 EXOC6BQ9Y2D4 811 aa10.65□□□□□ -0.7
MRPS28-207ENST00000521434 ASB14A6NK59 587 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 PRR33A8MZF0 331 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 KIF28PB7ZC32 967 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 DYNC1LI2O43237 492 aaPredicted RBP10.64□□□□□ -0.71
MRPS28-207ENST00000521434 SUPT20HL2P0C7V6 817 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 SMPD1P17405 629 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 ADD2P35612 726 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 PSMC6P62333 389 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 CTR9Q6PD62 1173 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 DEFB128Q7Z7B8 93 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 HS6ST3Q8IZP7 471 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 KIFC2Q96AC6 838 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 HOMER2Q9NSB8 354 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 FEM1BQ9UK73 627 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 Q9Y3F1 56 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 SCN10AQ9Y5Y9 1956 aa10.64□□□□□ -0.71
MRPS28-207ENST00000521434 ZBED9Q6R2W3 1325 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 LCTP09848 1927 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
MRPS28-207ENST00000521434 ARHGEF15O94989 841 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 CYP2C9P11712 490 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 RFC2P35250 354 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 GRB10Q13322 594 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 SLFNL1Q499Z3 407 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 IQSEC1Q6DN90 963 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 HERC6Q8IVU3 1022 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.71
MRPS28-207ENST00000521434 ACAD9Q9H845 621 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 CD320Q9NPF0 282 aa10.63□□□□□ -0.71
MRPS28-207ENST00000521434 TRMT13Q9NUP7 481 aaKnown RBP10.63□□□□□ -0.71
MRPS28-207ENST00000521434 STK24Q9Y6E0 443 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms