RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 CNGA1P29973 690 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 ZNF543Q08ER8 600 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 SYDE2Q5VT97 1194 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 TTBK2Q6IQ55 1244 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 ANKRD35Q8N283 1001 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 ENAHQ8N8S7 591 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 PNMA1Q8ND90 353 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 TRPV1Q8NER1 839 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 DPF3Q92784 378 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 AGBL1Q96MI9 1066 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 UBAC1Q9BSL1 405 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 KAT14Q9H8E8 782 aa12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 BAZ2BQ9UIF8 2168 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 MKI67P46013 3256 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-209ENST00000521167 SYNGAP1Q96PV0 1343 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 SEPT4O43236 478 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 ICAM1P05362 532 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 EMP3P54852 163 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 MAMDC4Q6UXC1 1216 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 TRERF1Q96PN7 1200 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 RNF146Q9NTX7 359 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 NR2E3Q9Y5X4 410 aa12.19□□□□□ -0.46
TRAPPC9-209ENST00000521167 PFASO15067 1338 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 TNKSO95271 1327 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 FRMPD2Q68DX3 1309 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 E7EWF7 191 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 ALAS1P13196 640 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 SLC16A2P36021 539 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 PRAMEF19Q5SWL8 479 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 ARRDC4Q8NCT1 418 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 NCOA7Q8NI08 942 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 DIS3LQ8TF46 1054 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 C11orf49Q9H6J7 331 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 CCPG1Q9ULG6 757 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 RBM8AQ9Y5S9 174 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-209ENST00000521167 COL6A1P12109 1028 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 SNAP25P60880 206 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 SEC23AQ15436 765 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 IFIT1BQ5T764 474 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 ERICH6BQ5W0A0 696 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 CYB5R4Q7L1T6 521 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 RALYLQ86SE5 291 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 FAM133AQ8N9E0 248 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 MTA3Q9BTC8 594 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 MAF1Q9H063 256 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 LSG1Q9H089 658 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 HOMER2Q9NSB8 354 aa12.17□□□□□ -0.46
TRAPPC9-209ENST00000521167 WDR19Q8NEZ3 1342 aa12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 ERICH2A1L162 156 aa12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 ASB14A6NK59 587 aa12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 EVI5O60447 810 aa12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 SNAI1O95863 264 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 ZNF865P0CJ78 1059 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 SART3Q15020 963 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 CASC1Q6TDU7 716 aa12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 ABHD16BQ9H3Z7 469 aa12.16□□□□□ -0.46
TRAPPC9-209ENST00000521167 LCTP09848 1927 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 LOC102724159A0A0B4J2E5 919 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 H0YGN5 161 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 DNM1LO00429 736 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 IFIT3O14879 490 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 CDC45O75419 566 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 RARBP10826 455 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 AKR1A1P14550 325 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 TAL1P17542 331 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 PWP2Q15269 919 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 MUM1L1Q5H9M0 696 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 STOX1Q6ZVD7 989 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 SKAP1Q86WV1 359 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 FGD4Q96M96 766 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 CYP39A1Q9NYL5 469 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 FAM184BQ9ULE4 1060 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 TRIOBPQ9H2D6 2365 aa12.15□□□□□ -0.46
TRAPPC9-209ENST00000521167 C2orf72A6NCS6 295 aa12.14□□□□□ -0.47
TRAPPC9-209ENST00000521167 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
TRAPPC9-209ENST00000521167 KBTBD13C9JR72 458 aa12.14□□□□□ -0.47
TRAPPC9-209ENST00000521167 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
TRAPPC9-209ENST00000521167 ACVR2BQ13705 512 aa12.14□□□□□ -0.47
TRAPPC9-209ENST00000521167 WTAPQ15007 396 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms