RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 PTCHD1Q96NR3 888 aa7.63□□□□□ -1.19
PTPN12-214ENST00000520947 SLC26A8Q96RN1 970 aa7.63□□□□□ -1.19
PTPN12-214ENST00000520947 MCOLN1Q9GZU1 580 aa7.63□□□□□ -1.19
PTPN12-214ENST00000520947 ZNF552Q9H707 407 aaPredicted RBP7.63□□□□□ -1.19
PTPN12-214ENST00000520947 MYOCOSA0A1B0GUC4 107 aa7.62□□□□□ -1.19
PTPN12-214ENST00000520947 ETV2O00321 342 aaPredicted RBP7.62□□□□□ -1.19
PTPN12-214ENST00000520947 NFIBO00712 420 aa7.62□□□□□ -1.19
PTPN12-214ENST00000520947 AURKAO14965 403 aa7.62□□□□□ -1.19
PTPN12-214ENST00000520947 KCNH1O95259 989 aa7.62□□□□□ -1.19
PTPN12-214ENST00000520947 ARL4AP40617 200 aa7.62□□□□□ -1.19
PTPN12-214ENST00000520947 ZNF513Q8N8E2 541 aaPredicted RBP7.62□□□□□ -1.19
PTPN12-214ENST00000520947 MICAL1Q8TDZ2 1067 aa7.62□□□□□ -1.19
PTPN12-214ENST00000520947 RCC1LQ96I51 464 aaKnown RBP7.62□□□□□ -1.19
PTPN12-214ENST00000520947 TBC1D8O95759 1140 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 TSPAN15O95858 294 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 KRT1P04264 644 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 MSL3P1P0C860 447 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 NAT2P11245 290 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 SEPHS1P49903 392 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 MVKQ03426 396 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 RCSD1Q6JBY9 416 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 ATG14Q6ZNE5 492 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 SLC43A3Q8NBI5 491 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 BVESQ8NE79 360 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 BHLHE22Q8NFJ8 381 aaPredicted RBP7.61□□□□□ -1.19
PTPN12-214ENST00000520947 SGPP1Q9BX95 441 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 ACSL6Q9UKU0 697 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 BACE2Q9Y5Z0 518 aa7.61□□□□□ -1.19
PTPN12-214ENST00000520947 C2orf71A6NGG8 1288 aa7.6□□□□□ -1.19
PTPN12-214ENST00000520947 DBX1A6NMT0 343 aa7.6□□□□□ -1.19
PTPN12-214ENST00000520947 NOP56O00567 594 aaKnown RBP7.6□□□□□ -1.19
PTPN12-214ENST00000520947 GRB10Q13322 594 aa7.6□□□□□ -1.19
PTPN12-214ENST00000520947 LAPTM5Q13571 262 aa7.6□□□□□ -1.19
PTPN12-214ENST00000520947 FXNQ16595 210 aa7.6□□□□□ -1.19
PTPN12-214ENST00000520947 LCE1DQ5T752 114 aa7.6□□□□□ -1.19
PTPN12-214ENST00000520947 EEF1DP3Q658K8 133 aa7.6□□□□□ -1.19
PTPN12-214ENST00000520947 HNRNPLLQ8WVV9 542 aaKnown RBP7.6□□□□□ -1.19
PTPN12-214ENST00000520947 EMC9Q9Y3B6 208 aa7.6□□□□□ -1.19
PTPN12-214ENST00000520947 R3HCC1Q9Y3T6 440 aaKnown RBP7.6□□□□□ -1.19
PTPN12-214ENST00000520947 NUDT19A8MXV4 375 aa7.59□□□□□ -1.19
PTPN12-214ENST00000520947 IGSF3O75054 1194 aa7.59□□□□□ -1.19
PTPN12-214ENST00000520947 TACR1P25103 407 aa7.59□□□□□ -1.19
PTPN12-214ENST00000520947 ZNF143P52747 638 aaPredicted RBP7.59□□□□□ -1.19
PTPN12-214ENST00000520947 SRSF3P84103 164 aaKnown RBP7.59□□□□□ -1.19
PTPN12-214ENST00000520947 RAB3GAP1Q15042 981 aa7.59□□□□□ -1.19
PTPN12-214ENST00000520947 SV2CQ496J9 727 aa7.59□□□□□ -1.19
PTPN12-214ENST00000520947 CPNE8Q86YQ8 564 aa7.59□□□□□ -1.19
PTPN12-214ENST00000520947 ST7Q9NRC1 585 aa7.59□□□□□ -1.19
PTPN12-214ENST00000520947 A0A1W2PQJ5 194 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 TCAF2A6NFQ2 919 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 PEX10O60683 326 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 MPOP05164 745 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 ERVFRD-1P60508 538 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 MRM1Q6IN84 353 aaKnown RBP7.58□□□□□ -1.2
PTPN12-214ENST00000520947 POMZP3Q6PJE2 187 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 ANKS3Q6ZW76 656 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 ANKLE2Q86XL3 938 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 CRACR2BQ8N4Y2 399 aaPredicted RBP7.58□□□□□ -1.2
PTPN12-214ENST00000520947 SREK1Q8WXA9 508 aaKnown RBP7.58□□□□□ -1.2
PTPN12-214ENST00000520947 GMLQ99445 158 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 LRP2BPQ9P2M1 347 aa7.58□□□□□ -1.2
PTPN12-214ENST00000520947 TEX51A0A1B0GUA7 166 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 NPIPB6E9PJ23 425 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 SUSD5O60279 629 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 GJB6O95452 261 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 GLDCP23378 1020 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 L1CAMP32004 1257 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 VIPR1P32241 457 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 DLG4P78352 724 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 SCRN1Q12765 414 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 BICRALQ6AI39 1079 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 GTF2IRD2BQ6EKJ0 949 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 GTF2IRD2Q86UP8 949 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 CELF2-AS1Q8N7Q2 184 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 TNFRSF12AQ9NP84 129 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 GPRC5CQ9NQ84 441 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 SIRT5Q9NXA8 310 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 KLHL14Q9P2G3 628 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 USP35Q9P2H5 1018 aa7.57□□□□□ -1.2
PTPN12-214ENST00000520947 SMG5Q9UPR3 1016 aaKnown RBP7.57□□□□□ -1.2
PTPN12-214ENST00000520947 TBX1O43435 398 aa7.56□□□□□ -1.2
PTPN12-214ENST00000520947 SEMA7AO75326 666 aa7.56□□□□□ -1.2
PTPN12-214ENST00000520947 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
PTPN12-214ENST00000520947 TRIM59Q8IWR1 403 aa7.56□□□□□ -1.2
PTPN12-214ENST00000520947 BTN2A2Q8WVV5 523 aa7.56□□□□□ -1.2
PTPN12-214ENST00000520947 MRGPRX3Q96LB0 322 aa7.56□□□□□ -1.2
PTPN12-214ENST00000520947 CLEC1BQ9P126 229 aa7.56□□□□□ -1.2
PTPN12-214ENST00000520947 NPHP3-ACAD11A0A0J9YXS1 232 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 ITGAVP06756 1048 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 PAMP19021 973 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 YBX1P67809 324 aaKnown RBP7.55□□□□□ -1.2
PTPN12-214ENST00000520947 KCNA10Q16322 511 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 TMC6Q7Z403 805 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 TANGO6Q9C0B7 1094 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 CD320Q9NPF0 282 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 PDLIM7Q9NR12 457 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 MBD1Q9UIS9 605 aaPredicted RBP7.55□□□□□ -1.2
PTPN12-214ENST00000520947 RWDD3Q9Y3V2 267 aa7.55□□□□□ -1.2
PTPN12-214ENST00000520947 PLS3P13797 630 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms