RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 FNBP4Q8N3X1 1017 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 HEXIM1O94992 359 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 CSF1RP07333 972 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 PKN1Q16512 942 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 CEP85LQ5SZL2 805 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 ADSSL1Q8N142 457 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 CABS1Q96KC9 395 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 SCLT1Q96NL6 688 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 SLC39A2Q9NP94 309 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 JAG2Q9Y219 1238 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 PCDHA13Q9Y5I0 950 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 MYH8P13535 1937 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 TCRBV5S4A2TA0A5A2 114 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 ANO9A1A5B4 782 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 LRRC10BA6NIK2 292 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 AGPSO00116 658 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 EPS15P42566 896 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 LETM2Q2VYF4 491 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 CCDC170Q8IYT3 715 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 KAT2BQ92831 832 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 HPS3Q969F9 1004 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 MS4A14Q96JA4 679 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 OSBPL9Q96SU4 736 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 DISC1Q9NRI5 854 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 CALML3P27482 149 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 KIF11P52732 1056 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 CCDC121Q6ZUS5 278 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 DYMQ7RTS9 669 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 DNAJC7Q99615 494 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 SEC24CP53992 1094 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 CFAP221Q4G0U5 840 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 BLIDQ8IZY5 108 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 MTRQ99707 1265 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 VAT1LQ9HCJ6 419 aa14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 AFDNP55196 1824 aaKnown RBP14.24□□□□□ -0.13
TRAPPC9-208ENST00000520857 LONP1P36776 959 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 APBA1Q02410 837 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 PAK2Q13177 524 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 PDXDC2PQ6P474 469 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 TSEN2Q8NCE0 465 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 NOX5Q96PH1 765 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 KRT12Q99456 494 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 ZHX3Q9H4I2 956 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 LUC7LQ9NQ29 371 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 GEMIN8Q9NWZ8 242 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 A0A1W2PQC6 194 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 ERVV-2B6SEH9 535 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 FTCDO95954 541 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 KIF5BP33176 963 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 TMC4Q7Z404 712 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 DZIP3Q86Y13 1208 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 P2RX5Q93086 422 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 THAP9Q9H5L6 903 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 YY1AP1Q9H869 796 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 STX8Q9UNK0 236 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 FAM170AA1A519 330 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 ARID4AP29374 1257 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 GYG1P46976 350 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 CCDC40Q4G0X9 1142 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 EMBQ6PCB8 327 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 ZIM3Q96PE6 472 aa14.23□□□□□ -0.13
TRAPPC9-208ENST00000520857 TMCO5BA8MYB1 307 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 VEGFAP15692 232 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 NR1D1P20393 614 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 TMTC3Q6ZXV5 915 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 IRF2BP1Q8IU81 584 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 SRBD1Q8N5C6 995 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 RBM12Q9NTZ6 932 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 MROH5Q6ZUA9 1318 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 ZSCAN5CA6NGD5 496 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 BACH1O14867 736 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 CABP7Q86V35 215 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 SRGNP10124 158 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 FCER1AP12319 257 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 IL2RBP14784 551 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 NF2P35240 595 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 CARSP49589 748 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 ANKRD40Q6AI12 368 aa14.22□□□□□ -0.13
TRAPPC9-208ENST00000520857 ACTN3Q08043 901 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 EHHADHQ08426 723 aa14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 ALS2CLQ60I27 953 aa14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 CXorf56Q9H5V9 222 aa14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 PACSIN2Q9UNF0 486 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 AMPD3Q01432 767 aa14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 SF3B2Q13435 895 aaKnown RBP14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 AENQ8WTP8 325 aaKnown RBP14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 CALML4Q96GE6 196 aa14.21□□□□□ -0.13
TRAPPC9-208ENST00000520857 PLCG1P19174 1290 aa14.21□□□□□ -0.14
TRAPPC9-208ENST00000520857 CCNE1P24864 410 aa14.21□□□□□ -0.14
TRAPPC9-208ENST00000520857 GFPT1Q06210 699 aaPredicted RBP14.21□□□□□ -0.14
TRAPPC9-208ENST00000520857 RETREG2Q8NC44 543 aa14.21□□□□□ -0.14
TRAPPC9-208ENST00000520857 UBLCP1Q8WVY7 318 aaPredicted RBP14.21□□□□□ -0.14
TRAPPC9-208ENST00000520857 RNPC3Q96LT9 517 aaKnown RBP14.21□□□□□ -0.14
TRAPPC9-208ENST00000520857 MKNK2Q9HBH9 465 aa14.21□□□□□ -0.14
TRAPPC9-208ENST00000520857 PDS5AQ29RF7 1337 aaKnown RBP14.21□□□□□ -0.14
TRAPPC9-208ENST00000520857 MEFVO15553 781 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms