RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 RPRD2Q5VT52 1461 aaKnown RBP9.95□□□□□ -0.82
SDCBP-208ENST00000520228 EFCAB6Q5THR3 1501 aa9.95□□□□□ -0.82
SDCBP-208ENST00000520228 CAMSAP1Q5T5Y3 1602 aa9.95□□□□□ -0.82
SDCBP-208ENST00000520228 MYO3AQ8NEV4 1616 aa9.95□□□□□ -0.82
SDCBP-208ENST00000520228 UGGT1Q9NYU2 1555 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 PTPRTO14522 1441 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 PITPNM2Q9BZ72 1349 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 DDAH1O94760 285 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 PRNPP04156 253 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 CD247P20963 164 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 CDKAL1Q5VV42 579 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 TMC3Q7Z5M5 1100 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 THAP5Q7Z6K1 395 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 LNPKQ9C0E8 428 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 GP6Q9HCN6 339 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 BSDC1Q9NW68 430 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-208ENST00000520228 PCDHB12Q9Y5F1 795 aa9.94□□□□□ -0.82
SDCBP-208ENST00000520228 UNC13BO14795 1591 aa9.93□□□□□ -0.82
SDCBP-208ENST00000520228 EPHX1P07099 455 aa9.93□□□□□ -0.82
SDCBP-208ENST00000520228 NMIQ13287 307 aaPredicted RBP9.93□□□□□ -0.82
SDCBP-208ENST00000520228 ZNF513Q8N8E2 541 aaPredicted RBP9.93□□□□□ -0.82
SDCBP-208ENST00000520228 ENOX1Q8TC92 643 aaKnown RBP9.93□□□□□ -0.82
SDCBP-208ENST00000520228 MKL1Q969V6 931 aa9.93□□□□□ -0.82
SDCBP-208ENST00000520228 VAV3Q9UKW4 847 aa9.93□□□□□ -0.82
SDCBP-208ENST00000520228 EID1Q9Y6B2 187 aa9.93□□□□□ -0.82
SDCBP-208ENST00000520228 CEP152O94986 1710 aa9.93□□□□□ -0.82
SDCBP-208ENST00000520228 SIGLEC6O43699 453 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 SSTR4P31391 388 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 ZNF143P52747 638 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-208ENST00000520228 PRKCQQ04759 706 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 GAB4Q2WGN9 574 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 WFDC3Q8IUB2 231 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 MISP3Q96FF7 219 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 HRASLS5Q96KN8 279 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 HDAC8Q9BY41 377 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 CCDC113Q9H0I3 377 aa9.92□□□□□ -0.82
SDCBP-208ENST00000520228 SETD5Q9C0A6 1442 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 ANKRD34BA5PLL1 514 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 WASH4PA8MWX3 477 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 H3BS24 57 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 U2SURPO15042 1029 aaKnown RBP9.91□□□□□ -0.82
SDCBP-208ENST00000520228 LTKP29376 864 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 ZNF445P59923 1031 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 HEATR6Q6AI08 1181 aaKnown RBP9.91□□□□□ -0.82
SDCBP-208ENST00000520228 NFXL1Q6ZNB6 911 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 LRP10Q7Z4F1 713 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 TSPYL5Q86VY4 417 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-208ENST00000520228 SYTL5Q8TDW5 730 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-208ENST00000520228 BCL7CQ8WUZ0 217 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-208ENST00000520228 OSBPL2Q9H1P3 480 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 TRIT1Q9H3H1 467 aaKnown RBP9.91□□□□□ -0.82
SDCBP-208ENST00000520228 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
SDCBP-208ENST00000520228 TMEM2Q9UHN6 1383 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 ZNF142P52746 1687 aaPredicted RBP9.9□□□□□ -0.82
SDCBP-208ENST00000520228 A0A087WZG4 1122 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 PRAMEF1O95521 474 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 RASA3Q14644 834 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 TCEAL1Q15170 157 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 AOC3Q16853 763 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 DPH6Q7L8W6 267 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 DAGLBQ8NCG7 672 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 UBE2FQ969M7 185 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 GPATCH2Q9NW75 528 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 GFOD1Q9NXC2 390 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 WHRNQ9P202 907 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 ZSWIM5Q9P217 1185 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 FHOD1Q9Y613 1164 aa9.9□□□□□ -0.82
SDCBP-208ENST00000520228 TET3O43151 1660 aa9.9□□□□□ -0.83
SDCBP-208ENST00000520228 IQGAP3Q86VI3 1631 aa9.89□□□□□ -0.83
SDCBP-208ENST00000520228 SUSD5O60279 629 aa9.89□□□□□ -0.83
SDCBP-208ENST00000520228 CCDC144BQ3MJ40 725 aa9.89□□□□□ -0.83
SDCBP-208ENST00000520228 MPHOSPH9Q99550 1183 aa9.89□□□□□ -0.83
SDCBP-208ENST00000520228 ATP13A1Q9HD20 1204 aa9.89□□□□□ -0.83
SDCBP-208ENST00000520228 CHST7Q9NS84 486 aa9.89□□□□□ -0.83
SDCBP-208ENST00000520228 CCDC39Q9UFE4 941 aa9.89□□□□□ -0.83
SDCBP-208ENST00000520228 NPHP4O75161 1426 aaPredicted RBP9.89□□□□□ -0.83
SDCBP-208ENST00000520228 SYNMO15061 1565 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 ZNF335Q9H4Z2 1342 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-208ENST00000520228 ITGA4P13612 1032 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 TPP2P29144 1249 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-208ENST00000520228 BNIP3Q12983 259 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 ZMYM1Q5SVZ6 1142 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 EEPD1Q7L9B9 569 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 STK11IPQ8N1F8 1099 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 ASB11Q8WXH4 323 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 FGD4Q96M96 766 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 ASCC2Q9H1I8 757 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-208ENST00000520228 APEX2Q9UBZ4 518 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 MINPP1Q9UNW1 487 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 STRCQ7RTU9 1775 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 RAB3GAP2Q9H2M9 1393 aa9.88□□□□□ -0.83
SDCBP-208ENST00000520228 SCAF11Q99590 1463 aaKnown RBP9.87□□□□□ -0.83
SDCBP-208ENST00000520228 ARHGAP23Q9P227 1491 aa9.87□□□□□ -0.83
SDCBP-208ENST00000520228 FAM221BA6H8Z2 402 aa9.87□□□□□ -0.83
SDCBP-208ENST00000520228 PDPK1O15530 556 aa9.87□□□□□ -0.83
SDCBP-208ENST00000520228 ESR1P03372 595 aa9.87□□□□□ -0.83
SDCBP-208ENST00000520228 RASGRF1Q13972 1273 aa9.87□□□□□ -0.83
SDCBP-208ENST00000520228 TMPRSS7Q7RTY8 843 aa9.87□□□□□ -0.83
SDCBP-208ENST00000520228 SPRED2Q7Z698 418 aa9.87□□□□□ -0.83
SDCBP-208ENST00000520228 ZNF655Q8N720 491 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms