RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 GOPCQ9HD26 462 aa10.31□□□□□ -0.76
PABPC1-213ENST00000519848 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
PABPC1-213ENST00000519848 NEDD4P46934 1319 aa10.31□□□□□ -0.76
PABPC1-213ENST00000519848 CDH23Q9H251 3354 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 STRNO43815 780 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 ZFYP08048 801 aaPredicted RBP10.3□□□□□ -0.76
PABPC1-213ENST00000519848 HDAC1Q13547 482 aaPredicted RBP10.3□□□□□ -0.76
PABPC1-213ENST00000519848 SLFN13Q68D06 897 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 RCSD1Q6JBY9 416 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 KCTD1Q719H9 257 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
PABPC1-213ENST00000519848 GUCD1Q96NT3 240 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 TINF2Q9BSI4 451 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 TEX13BQ9BXU2 312 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 UBE2OQ9C0C9 1292 aaKnown RBP10.3□□□□□ -0.76
PABPC1-213ENST00000519848 SH2D4AQ9H788 454 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 MKNK2Q9HBH9 465 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 HOMER2Q9NSB8 354 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 PHF24Q9UPV7 400 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 ATP11BQ9Y2G3 1177 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 GBF1Q92538 1859 aa10.3□□□□□ -0.76
PABPC1-213ENST00000519848 A0A1W2PQ45 241 aaPredicted RBP10.29□□□□□ -0.76
PABPC1-213ENST00000519848 A0A1W2PQY0 241 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 ATP2A1O14983 1001 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 APPP05067 770 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 FGRP09769 529 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 MCCP23508 829 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 PDE4AP27815 886 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 SLC4A3P48751 1232 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 HAND2P61296 217 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 COL9A3Q14050 684 aaPredicted RBP10.29□□□□□ -0.76
PABPC1-213ENST00000519848 SHHQ15465 462 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 LRIT3Q3SXY7 679 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 SMC5Q8IY18 1101 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 NAPBQ9H115 298 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 CPVLQ9H3G5 476 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 CHMP4BQ9H444 224 aaKnown RBP10.29□□□□□ -0.76
PABPC1-213ENST00000519848 A1CFQ9NQ94 594 aaKnown RBP10.29□□□□□ -0.76
PABPC1-213ENST00000519848 XPNPEP3Q9NQH7 507 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 TAF6LQ9Y6J9 622 aa10.29□□□□□ -0.76
PABPC1-213ENST00000519848 TMEM232C9JQI7 657 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 SLC25A27O95847 323 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 TTLL1O95922 423 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 GNAT2P19087 354 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 SLC16A2P36021 539 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 TLE2Q04725 743 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
PABPC1-213ENST00000519848 MAMDC4Q6UXC1 1216 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 FAM133AQ8N9E0 248 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 KLHDC9Q8NEP7 349 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 PPP1R13LQ8WUF5 828 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 BADQ92934 168 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 VWCEQ96DN2 955 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 PDGFCQ9NRA1 345 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 MTMR10Q9NXD2 777 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.28□□□□□ -0.76
PABPC1-213ENST00000519848 ANAPC4Q9UJX5 808 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 PRR12Q9ULL5 1215 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 MTMR7Q9Y216 660 aa10.28□□□□□ -0.76
PABPC1-213ENST00000519848 FRMPD2Q68DX3 1309 aaPredicted RBP10.28□□□□□ -0.76
PABPC1-213ENST00000519848 NFIBO00712 420 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 MSCO60682 206 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 FGAP02671 866 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 TSPY3P0CV98 308 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 TSPY8P0CW00 308 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 HSPD1P10809 573 aaKnown RBP10.27□□□□□ -0.77
PABPC1-213ENST00000519848 BMP3P12645 472 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 CAPN2P17655 700 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 KCTD2Q14681 263 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 B4GALNT3Q6L9W6 998 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 SLC30A10Q6XR72 485 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 ARMCX2Q7L311 632 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 AMOTL1Q8IY63 956 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 CCDC144CPQ8IYA2 1237 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 DEFB123Q8N688 67 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
PABPC1-213ENST00000519848 DDRGK1Q96HY6 314 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 GMCL1Q96IK5 515 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 FAM161BQ96MY7 647 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 RNF146Q9NTX7 359 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 ZHX1Q9UKY1 873 aaPredicted RBP10.27□□□□□ -0.77
PABPC1-213ENST00000519848 GRIN2DO15399 1336 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 UMODL1Q5DID0 1318 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 PTPRSQ13332 1948 aa10.27□□□□□ -0.77
PABPC1-213ENST00000519848 PPP1R3GB7ZBB8 358 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 ERC2O15083 957 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 ORC4O43929 436 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 GSPT1P15170 499 aaKnown RBP10.26□□□□□ -0.77
PABPC1-213ENST00000519848 ACLYP53396 1101 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 BEX3Q00994 111 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 CCDC174Q6PII3 467 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 ZNF444Q8N0Y2 327 aaPredicted RBP10.26□□□□□ -0.77
PABPC1-213ENST00000519848 EVI5LQ96CN4 794 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 TMEM47Q9BQJ4 181 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms