RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, human

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-208	ENST00000519481		A0A0D9SFI3	127 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	MYADML2	A6NDP7	307 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	SOWAHB	A6NEL2	793 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	ICAM1	P05362	532 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	FGR	P09769	529 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	HSPD1	P10809	573 aa	Known RBP	12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	SNAP25	P60880	206 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	FAAP100	Q0VG06	881 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	SYDE2	Q5VT97	1194 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	MFSD6	Q6ZSS7	791 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	RNF41	Q9H4P4	317 aa	Predicted RBP	12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	TCP11L1	Q9NUJ3	509 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	ADD3	Q9UEY8	706 aa	Known RBP	12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	ZMYM6	O95789	1325 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	CCDC171	Q6TFL3	1326 aa		12.81	□□□□□ -0.36
PVT1-208	ENST00000519481	ARVCF	O00192	962 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	CABYR	O75952	493 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	TIMP1	P01033	207 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	NOV	P48745	357 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	NMI	Q13287	307 aa	Predicted RBP	12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	MUM1L1	Q5H9M0	696 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	IQSEC1	Q6DN90	963 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	B4GALNT3	Q6L9W6	998 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	TTC14	Q96N46	770 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	TMEM47	Q9BQJ4	181 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	RANBP17	Q9H2T7	1088 aa	Known RBP	12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	CYP39A1	Q9NYL5	469 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	MCM3AP	O60318	1980 aa		12.8	□□□□□ -0.36
PVT1-208	ENST00000519481	DYNC1LI2	O43237	492 aa	Predicted RBP	12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	ADCY6	O43306	1168 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	ITGB8	P26012	769 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	SLC16A2	P36021	539 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	NT5C2	P49902	561 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	CDK7	P50613	346 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	HAND2	P61296	217 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	PPIG	Q13427	754 aa	Known RBP eCLIP	12.79	□□□□□ -0.36	6e-7	■■□□□ 13.4
PVT1-208	ENST00000519481	AKNAD1	Q5T1N1	836 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	BTNL9	Q6UXG8	535 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	TLK2	Q86UE8	772 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	TMEM199	Q8N511	208 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	ESR2	Q92731	530 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	GUCD1	Q96NT3	240 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	MPHOSPH6	Q99547	160 aa	Known RBP	12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	SEZ6L	Q9BYH1	1024 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	KATNBL1	Q9H079	304 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	SEMA6B	Q9H3T3	888 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	VTA1	Q9NP79	307 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	GPCPD1	Q9NPB8	672 aa		12.79	□□□□□ -0.36
PVT1-208	ENST00000519481	TMEM265	A0A087WTH1	108 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	LOC102724159	A0A0B4J2E5	919 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	PTPDC1	A2A3K4	754 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	HIP1	O00291	1037 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	ZNF213	O14771	459 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	NKX3-2	P78367	333 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	IRX5	P78411	483 aa	Predicted RBP	12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	BEX3	Q00994	111 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	BAAT	Q14032	418 aa	Predicted RBP	12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	PWP2	Q15269	919 aa	Known RBP	12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	FSCN1	Q16658	493 aa	Known RBP	12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	CCDC178	Q5BJE1	867 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	TTBK2	Q6IQ55	1244 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	MFSD5	Q6N075	450 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	KIAA1211	Q6ZU35	1233 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	EEPD1	Q7L9B9	569 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	RASGRP2	Q7LDG7	609 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	CHD1L	Q86WJ1	897 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	SMC5	Q8IY18	1101 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	YTHDC1	Q96MU7	727 aa	Known RBP	12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	DIAPH3	Q9NSV4	1193 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	TBX21	Q9UL17	535 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481		Q9Y3F1	56 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	COL6A3	P12111	3177 aa		12.78	□□□□□ -0.36
PVT1-208	ENST00000519481	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.77	□□□□□ -0.37
PVT1-208	ENST00000519481		B4DLN1	442 aa		12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	PDHB	P11177	359 aa		12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	SDS	P20132	328 aa		12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	MRPL12	P52815	198 aa	Known RBP	12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	EPHB4	P54760	987 aa		12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	GPATCH4	Q5T3I0	446 aa	Known RBP	12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	CXCL17	Q6UXB2	119 aa		12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	IQCA1	Q86XH1	822 aa		12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	FBXO16	Q8IX29	292 aa	Predicted RBP	12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	CDX2	Q99626	313 aa	Predicted RBP	12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	GNE	Q9Y223	722 aa	Known RBP	12.77	□□□□□ -0.37
PVT1-208	ENST00000519481	SMPD1	P17405	629 aa		12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	ALDH5A1	P51649	535 aa	Predicted RBP	12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	ZNF543	Q08ER8	600 aa		12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	ITGA7	Q13683	1181 aa		12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	BRDT	Q58F21	947 aa	Predicted RBP	12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	TAPT1	Q6NXT6	567 aa		12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	RNF207	Q6ZRF8	634 aa		12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	FAM126B	Q8IXS8	530 aa		12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	MORC4	Q8TE76	937 aa		12.76	□□□□□ -0.37
PVT1-208	ENST00000519481	PPP1R12C	Q9BZL4	782 aa		12.76	□□□□□ -0.37

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