RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 USP17L21D6R901 530 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 GOLIM4O00461 696 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 ZEB2O60315 1214 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 GRB10Q13322 594 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 ALYREFQ86V81 257 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 KCNH6Q9H252 994 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 ACAD9Q9H845 621 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 CD320Q9NPF0 282 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 A1CFQ9NQ94 594 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 LMCD1Q9NZU5 365 aa10.08□□□□□ -0.8
CTNNA1-215ENST00000519309 COL4A6Q14031 1691 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 IGKV6D-41A0A0C4DH26 115 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 F5H6K3 240 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 ZBED4O75132 1171 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 BAIAP3O94812 1187 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 SUPT20HL2P0C7V6 817 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 FDX1P10109 184 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 ACTN1P12814 892 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 SMPD1P17405 629 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 RASA1P20936 1047 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 CNTN2Q02246 1040 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 KLRC3Q07444 240 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 CEP85Q6P2H3 762 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 HERC6Q8IVU3 1022 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 CPXCR1Q8N123 301 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 FRAT1Q92837 279 aaPredicted RBP10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 AP5M1Q9H0R1 490 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 RAVER2Q9HCJ3 691 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 FEM1BQ9UK73 627 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 TNKSO95271 1327 aa10.07□□□□□ -0.8
CTNNA1-215ENST00000519309 TRIP12Q14669 1992 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 WDFY4Q6ZS81 3184 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 ATG2AQ2TAZ0 1938 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 SOWAHBA6NEL2 793 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 RAD21O60216 631 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 MRE11P49959 708 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 PSMC6P62333 389 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 UBE3CQ15386 1083 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 ZKSCAN2Q63HK3 967 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 IQSEC1Q6DN90 963 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 CTR9Q6PD62 1173 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 RPAP2Q8IXW5 612 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 GMCL1P1Q8NEA9 526 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 ARNTL2Q8WYA1 636 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 DDRGK1Q96HY6 314 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 SNX27Q96L92 541 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 DNAJC2Q99543 621 aaKnown RBP10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 CERS4Q9HA82 394 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 VTA1Q9NP79 307 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 PAG1Q9NWQ8 432 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 EXOC6BQ9Y2D4 811 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 ZNF536O15090 1300 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 MICAL3Q7RTP6 2002 aa10.06□□□□□ -0.8
CTNNA1-215ENST00000519309 PTGS1P23219 599 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 PURAQ00577 322 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 NHLH1Q02575 133 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 TKFCQ3LXA3 575 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 LEXMQ3ZCV2 418 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 SBK1Q52WX2 424 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 HSP90AB4PQ58FF6 505 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 DIEXFQ68CQ4 756 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 TAPT1Q6NXT6 567 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 NOL8Q76FK4 1167 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 SPRED2Q7Z698 418 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 DEFB128Q7Z7B8 93 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 FBXO16Q8IX29 292 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 FAM178BQ8IXR5 827 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 RHPN1Q8TCX5 695 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 MKL1Q969V6 931 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 KIFC2Q96AC6 838 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■■■□ 26.4
CTNNA1-215ENST00000519309 UBE2ZQ9H832 354 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 IL1RAPL2Q9NP60 686 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 RNF146Q9NTX7 359 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 TRMT13Q9NUP7 481 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 RNF216Q9NWF9 866 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 CTDP1Q9Y5B0 961 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-215ENST00000519309 RALGAPA2Q2PPJ7 1873 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 NLRC5Q86WI3 1866 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 LOC102724159A0A0B4J2E5 919 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 KIF28PB7ZC32 967 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 DYNC1LI2O43237 492 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 CYP2C9P11712 490 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 PWP2Q15269 919 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 SLFNL1Q499Z3 407 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 DUSP28Q4G0W2 176 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 GIMAP6Q6P9H5 292 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 GJD3Q8N144 294 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 GDPD5Q8WTR4 605 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 HOMER2Q9NSB8 354 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 COG6Q9Y2V7 657 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 SLC4A4Q9Y6R1 1079 aa10.04□□□□□ -0.8
CTNNA1-215ENST00000519309 ZDBF2Q9HCK1 2354 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 PLA2G6O60733 806 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 IQCF3P0C7M6 154 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 RLBP1P12271 317 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms