RNA–Protein interactions for RNA: ENST00000518321.5

TVP23C-205, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-205ENST00000518321 SEMA6BQ9H3T3 888 aa16.52■□□□□ 0.24
TVP23C-205ENST00000518321 TBX21Q9UL17 535 aa16.52■□□□□ 0.24
TVP23C-205ENST00000518321 ARVCFO00192 962 aa16.51■□□□□ 0.23
TVP23C-205ENST00000518321 FGAP02671 866 aa16.51■□□□□ 0.23
TVP23C-205ENST00000518321 CDK7P50613 346 aa16.51■□□□□ 0.23
TVP23C-205ENST00000518321 SNAP25P60880 206 aa16.51■□□□□ 0.23
TVP23C-205ENST00000518321 NKX3-2P78367 333 aa16.51■□□□□ 0.23
TVP23C-205ENST00000518321 FAM227BQ96M60 508 aa16.51■□□□□ 0.23
TVP23C-205ENST00000518321 CDX2Q99626 313 aaPredicted RBP16.51■□□□□ 0.23
TVP23C-205ENST00000518321 CCPG1Q9ULG6 757 aa16.51■□□□□ 0.23
TVP23C-205ENST00000518321 A0A0D9SFI3 127 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-205ENST00000518321 CTAGE5O15320 804 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
TVP23C-205ENST00000518321 ICAM1P05362 532 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 ATXN8OSP0DMR3 200 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
TVP23C-205ENST00000518321 MUM1L1Q5H9M0 696 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 RRP12Q5JTH9 1297 aaKnown RBP16.5■□□□□ 0.23
TVP23C-205ENST00000518321 MFSD5Q6N075 450 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 AP5M1Q9H0R1 490 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 TCP11L1Q9NUJ3 509 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 CYP39A1Q9NYL5 469 aa16.5■□□□□ 0.23
TVP23C-205ENST00000518321 ZMYM6O95789 1325 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 TMEM265A0A087WTH1 108 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 A0A0C4DFX4 3053 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 CABYRO75952 493 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
TVP23C-205ENST00000518321 BEX3Q00994 111 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 PPIGQ13427 754 aaKnown RBP eCLIP16.49■□□□□ 0.231e-6■■□□□ 12.5
TVP23C-205ENST00000518321 IQSEC1Q6DN90 963 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 BTNL9Q6UXG8 535 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 NSMFQ6X4W1 530 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 TLK2Q86UE8 772 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
TVP23C-205ENST00000518321 TMEM47Q9BQJ4 181 aa16.49■□□□□ 0.23
TVP23C-205ENST00000518321 RANBP17Q9H2T7 1088 aaKnown RBP16.49■□□□□ 0.23
TVP23C-205ENST00000518321 TTYH1Q9H313 450 aaPredicted RBP16.49■□□□□ 0.23
TVP23C-205ENST00000518321 GNEQ9Y223 722 aaKnown RBP16.49■□□□□ 0.23
TVP23C-205ENST00000518321 ASTN1O14525 1302 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.48■□□□□ 0.23
TVP23C-205ENST00000518321 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.48■□□□□ 0.23
TVP23C-205ENST00000518321 TRIM6-TRIM34B2RNG4 842 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 ZEB2O60315 1214 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 PCP11498 1178 aaKnown RBP16.48■□□□□ 0.23
TVP23C-205ENST00000518321 NMIQ13287 307 aaPredicted RBP16.48■□□□□ 0.23
TVP23C-205ENST00000518321 AAMPQ13685 434 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
TVP23C-205ENST00000518321 SYDE2Q5VT97 1194 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 FAM126BQ8IXS8 530 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 TMEM199Q8N511 208 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 LNPKQ9C0E8 428 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 VTA1Q9NP79 307 aa16.48■□□□□ 0.23
TVP23C-205ENST00000518321 ADD3Q9UEY8 706 aaKnown RBP16.48■□□□□ 0.23
TVP23C-205ENST00000518321 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
TVP23C-205ENST00000518321 SMPD1P17405 629 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 SLC16A2P36021 539 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
TVP23C-205ENST00000518321 CXCL17Q6UXB2 119 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 EEPD1Q7L9B9 569 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 ZNF589Q86UQ0 364 aaPredicted RBP16.47■□□□□ 0.23
TVP23C-205ENST00000518321 FBXO16Q8IX29 292 aaPredicted RBP16.47■□□□□ 0.23
TVP23C-205ENST00000518321 MAFAQ8NHW3 353 aaPredicted RBP16.47■□□□□ 0.23
TVP23C-205ENST00000518321 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.47■□□□□ 0.23
TVP23C-205ENST00000518321 SEZ6LQ9BYH1 1024 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 Q9Y3F1 56 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 LRRC37A2A6NM11 1700 aa16.47■□□□□ 0.23
TVP23C-205ENST00000518321 FRMPD2Q68DX3 1309 aaPredicted RBP16.46■□□□□ 0.23
TVP23C-205ENST00000518321 UNC80Q8N2C7 3258 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 CD4P01730 458 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 HAND2P61296 217 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 BAATQ14032 418 aaPredicted RBP16.46■□□□□ 0.23
TVP23C-205ENST00000518321 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
TVP23C-205ENST00000518321 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 TAPT1Q6NXT6 567 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 SLC43A3Q8NBI5 491 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 MORC4Q8TE76 937 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 MYLIPQ8WY64 445 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 TTC14Q96N46 770 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 PPP1R12CQ9BZL4 782 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 PDGFCQ9NRA1 345 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 PNMA2Q9UL42 364 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
TVP23C-205ENST00000518321 CDH23Q9H251 3354 aa16.46■□□□□ 0.23
TVP23C-205ENST00000518321 PDHBP11177 359 aa16.45■□□□□ 0.22
TVP23C-205ENST00000518321 FOSL2P15408 326 aa16.45■□□□□ 0.22
TVP23C-205ENST00000518321 CSF2RAP15509 400 aa16.45■□□□□ 0.22
TVP23C-205ENST00000518321 DNAJB2P25686 324 aa16.45■□□□□ 0.22
TVP23C-205ENST00000518321 ITGA7Q13683 1181 aa16.45■□□□□ 0.22
TVP23C-205ENST00000518321 TMEM240Q5SV17 173 aa16.45■□□□□ 0.22
TVP23C-205ENST00000518321 PSRC1Q6PGN9 363 aaPredicted RBP16.45■□□□□ 0.22
TVP23C-205ENST00000518321 PURBQ96QR8 312 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms