RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 TTC19Q6DKK2 380 aaPredicted RBP16.94■□□□□ 0.3
PCM1-204ENST00000517730 TTI2Q6NXR4 508 aa16.94■□□□□ 0.3
PCM1-204ENST00000517730 C1orf131Q8NDD1 294 aaKnown RBP16.94■□□□□ 0.3
PCM1-204ENST00000517730 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 MROH5Q6ZUA9 1318 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 MYH2Q9UKX2 1941 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 RHOBTB3O94955 611 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 CCDC172P0C7W6 258 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 FGFR2P21802 821 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 HNRNPH3P31942 346 aaKnown RBP16.93■□□□□ 0.3
PCM1-204ENST00000517730 C8orf74Q6P047 294 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 IFT20Q8IY31 132 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 GIMAP8Q8ND71 665 aaPredicted RBP16.93■□□□□ 0.3
PCM1-204ENST00000517730 ZIM3Q96PE6 472 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 ERGIC2Q96RQ1 377 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 ZSCAN10Q96SZ4 725 aaPredicted RBP16.93■□□□□ 0.3
PCM1-204ENST00000517730 IFIH1Q9BYX4 1025 aaKnown RBP16.93■□□□□ 0.3
PCM1-204ENST00000517730 BICDL2A1A5D9 508 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 RASSF10A6NK89 507 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 KIF1CO43896 1103 aaKnown RBP16.93■□□□□ 0.3
PCM1-204ENST00000517730 SLC5A1P13866 664 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 MCM7P33993 719 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 NAP1L1P55209 391 aaKnown RBP16.93■□□□□ 0.3
PCM1-204ENST00000517730 CSGALNACT2Q8N6G5 542 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 PCMTD1Q96MG8 357 aaPredicted RBP16.93■□□□□ 0.3
PCM1-204ENST00000517730 DISC1Q9NRI5 854 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 RNF14Q9UBS8 474 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 PCDHA13Q9Y5I0 950 aa16.93■□□□□ 0.3
PCM1-204ENST00000517730 COL22A1Q8NFW1 1626 aaPredicted RBP16.93■□□□□ 0.3
PCM1-204ENST00000517730 TNS2Q63HR2 1409 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 ARAP2Q8WZ64 1704 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 DDAH1O94760 285 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 PLEKHA8P1O95397 391 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 LCA5LO95447 670 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 LSP1P33241 339 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 RASGRF1Q13972 1273 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 CFAP58Q5T655 872 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 IFIT1BQ5T764 474 aaKnown RBP16.92■□□□□ 0.3
PCM1-204ENST00000517730 PIK3AP1Q6ZUJ8 805 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 CD302Q8IX05 232 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 ENAHQ8N8S7 591 aaPredicted RBP16.92■□□□□ 0.3
PCM1-204ENST00000517730 TSKSQ9UJT2 592 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 CAPN6Q9Y6Q1 641 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 PPP1R2P41236 205 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 SLC7A5Q01650 507 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 FKBP15Q5T1M5 1219 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 TMTC3Q6ZXV5 915 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 MREGQ8N565 214 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 DONSONQ9NYP3 566 aa16.92■□□□□ 0.3
PCM1-204ENST00000517730 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 hCG_1642624A0A1W2PR95 340 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 ZNF263O14978 683 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 CHUKO15111 745 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 GPTP24298 496 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 PAK2Q13177 524 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 DRP2Q13474 957 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 NAA35Q5VZE5 725 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 ZSCAN29Q8IWY8 852 aaPredicted RBP16.91■□□□□ 0.3
PCM1-204ENST00000517730 IQCKQ8N0W5 287 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 PLAGL2Q9UPG8 496 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 MATR3P43243 847 aaKnown RBP eCLIP16.91■□□□□ 0.34e-7■■■■□ 22.9
PCM1-204ENST00000517730 NLRP5P59047 1200 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 CCDC47Q96A33 483 aaKnown RBP16.91■□□□□ 0.3
PCM1-204ENST00000517730 DUSP9Q99956 384 aaKnown RBP16.91■□□□□ 0.3
PCM1-204ENST00000517730 HINFPQ9BQA5 517 aa16.91■□□□□ 0.3
PCM1-204ENST00000517730 MYO1FO00160 1098 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 KLRC4O43908 158 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 PPP1R37O75864 691 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 MOCS3O95396 460 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 CCNE1P24864 410 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 RDXP35241 583 aaKnown RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 PSEN1P49768 467 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 GIGYF2Q6Y7W6 1299 aaKnown RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 NLRP10Q86W26 655 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 CNOT6LQ96LI5 555 aaKnown RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 GDF3Q9NR23 364 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 MTIF2P46199 727 aaKnown RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 ATP1A2P50993 1020 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 SMTNP53814 917 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 TROAPQ12815 778 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 PTGISQ16647 500 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 NFRKBQ6P4R8 1299 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 IQCA1Q86XH1 822 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 C4orf32Q8N8J7 132 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 ZCRB1Q8TBF4 217 aaKnown RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 ZNF473Q8WTR7 871 aaKnown RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 P2RX5Q93086 422 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 RNPC3Q96LT9 517 aaKnown RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 NOC4LQ9BVI4 516 aaKnown RBP16.9■□□□□ 0.3
PCM1-204ENST00000517730 VCPKMTQ9H867 229 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 CEP83Q9Y592 693 aa16.9■□□□□ 0.3
PCM1-204ENST00000517730 CNTNAP5Q8WYK1 1306 aa16.89■□□□□ 0.3
PCM1-204ENST00000517730 PJA2O43164 708 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 PCP11498 1178 aaKnown RBP16.89■□□□□ 0.29
PCM1-204ENST00000517730 KLK7P49862 253 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 KIF11P52732 1056 aa16.89■□□□□ 0.29
PCM1-204ENST00000517730 ACTN3Q08043 901 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms