RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 C2orf71A6NGG8 1288 aa8.39□□□□□ -1.07
SCARNA1-201ENST00000517138 ETV2O00321 342 aaPredicted RBP8.39□□□□□ -1.07
SCARNA1-201ENST00000517138 KLF4O43474 513 aa8.39□□□□□ -1.07
SCARNA1-201ENST00000517138 SUSD5O60279 629 aa8.39□□□□□ -1.07
SCARNA1-201ENST00000517138 HLA-DQA1Q5Y7H0 255 aa8.39□□□□□ -1.07
SCARNA1-201ENST00000517138 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
SCARNA1-201ENST00000517138 SLC38A3Q99624 504 aa8.39□□□□□ -1.07
SCARNA1-201ENST00000517138 GPRC5CQ9NQ84 441 aa8.39□□□□□ -1.07
SCARNA1-201ENST00000517138 OR14I1A6ND48 311 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 CYP4F8P98187 520 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 GRB10Q13322 594 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 FXNQ16595 210 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 CPNE8Q86YQ8 564 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 JAMLQ86YT9 394 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 CILP2Q8IUL8 1156 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 FBLN5Q9UBX5 448 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 BACE2Q9Y5Z0 518 aa8.38□□□□□ -1.07
SCARNA1-201ENST00000517138 PPP1R11O60927 126 aaPredicted RBP8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 ITGAVP06756 1048 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 YBX3P16989 372 aaKnown RBP eCLIP8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 TACR1P25103 407 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 ZNF143P52747 638 aaPredicted RBP8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 SCRN1Q12765 414 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 LAPTM5Q13571 262 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 SV2CQ496J9 727 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 GTF2IRD2BQ6EKJ0 949 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 CYP2R1Q6VVX0 501 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 GTF2IRD2Q86UP8 949 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 TRIM59Q8IWR1 403 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 BTN2A2Q8WVV5 523 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 GCM1Q9NP62 436 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 TNFRSF12AQ9NP84 129 aa8.37□□□□□ -1.07
SCARNA1-201ENST00000517138 SEPHS1P49903 392 aa8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 SF1Q15637 639 aaKnown RBP8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 EEF1DP3Q658K8 133 aa8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 MBLAC2Q68D91 279 aa8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 ZNF227Q86WZ6 799 aa8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 KCNN1Q92952 543 aa8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 CLEC1BQ9P126 229 aa8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 KLHL14Q9P2G3 628 aa8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 HCFC2Q9Y5Z7 792 aa8.36□□□□□ -1.07
SCARNA1-201ENST00000517138 NUDT19A8MXV4 375 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 TBC1D8O95759 1140 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 TSPAN15O95858 294 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 VIPR1P32241 457 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 JAG1P78504 1218 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 PKN1Q16512 942 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 ATG14Q6ZNE5 492 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 COPS5Q92905 334 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 SLC26A8Q96RN1 970 aa8.35□□□□□ -1.07
SCARNA1-201ENST00000517138 ARNTLO00327 626 aa8.34□□□□□ -1.07
SCARNA1-201ENST00000517138 NOP56O00567 594 aaKnown RBP8.34□□□□□ -1.07
SCARNA1-201ENST00000517138 THBDP07204 575 aa8.34□□□□□ -1.07
SCARNA1-201ENST00000517138 PLS3P13797 630 aa8.34□□□□□ -1.07
SCARNA1-201ENST00000517138 L1CAMP32004 1257 aa8.34□□□□□ -1.07
SCARNA1-201ENST00000517138 DDR2Q16832 855 aa8.34□□□□□ -1.07
SCARNA1-201ENST00000517138 MBD1Q9UIS9 605 aaPredicted RBP8.34□□□□□ -1.07
SCARNA1-201ENST00000517138 PLA2G2DQ9UNK4 145 aa8.34□□□□□ -1.07
SCARNA1-201ENST00000517138 A0A1W2PQ27 194 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 A0A1W2PQ64 194 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 A0A1W2PQC6 194 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 A0A1W2PQD8 194 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 PEX10O60683 326 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 TMEM253P0C7T8 217 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 GRIA2P42262 883 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 RAP1GAPP47736 663 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 YBX1P67809 324 aaKnown RBP8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 DLG4P78352 724 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 SRSF3P84103 164 aaKnown RBP8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 PRSS53Q2L4Q9 553 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 SLC10A6Q3KNW5 377 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 RPTNQ6XPR3 784 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 NKX2-4Q9H2Z4 354 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 RXFP1Q9HBX9 757 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 CD320Q9NPF0 282 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 GULP1Q9UBP9 304 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 TMEFF2Q9UIK5 374 aaPredicted RBP8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 R3HCC1Q9Y3T6 440 aaKnown RBP8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 RWDD3Q9Y3V2 267 aa8.33□□□□□ -1.08
SCARNA1-201ENST00000517138 TEX51A0A1B0GUA7 166 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 DBX1A6NMT0 343 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 NFIBO00712 420 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 NAT2P11245 290 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 ARL4AP40617 200 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 EPHB3P54753 998 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 INF2Q27J81 1249 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 POMZP3Q6PJE2 187 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 BHLHE22Q8NFJ8 381 aaPredicted RBP8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 FRS2Q8WU20 508 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 PPP1R16BQ96T49 567 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 CNTD2Q9H8S5 307 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 PDLIM7Q9NR12 457 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 CYP26B1Q9NR63 512 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 LRP2BPQ9P2M1 347 aa8.32□□□□□ -1.08
SCARNA1-201ENST00000517138 NPHP3-ACAD11A0A0J9YXS1 232 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms