RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 FCRL3Q96P31 734 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1088P-201ENST00000516850 SRRTQ9BXP5 876 aaKnown RBP4.82□□□□□ -1.64
RNU6-1088P-201ENST00000516850 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
RNU6-1088P-201ENST00000516850 TNFRSF12AQ9NP84 129 aa4.82□□□□□ -1.64
RNU6-1088P-201ENST00000516850 WHRNQ9P202 907 aa4.82□□□□□ -1.64
RNU6-1088P-201ENST00000516850 B8ZZF3 427 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 BUB1BO60566 1050 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 RECKO95980 971 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 HOXA5P20719 270 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 L1CAMP32004 1257 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 MAPKAPK2P49137 400 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 SLC7A5Q01650 507 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 MVKQ03426 396 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 CBX2Q14781 532 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PAQR3Q6TCH7 311 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 RPTNQ6XPR3 784 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 CABP7Q86V35 215 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PANK1Q8TE04 598 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PTCHD1Q96NR3 888 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PDLIM7Q9NR12 457 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 SUGT1Q9Y2Z0 365 aa4.81□□□□□ -1.64
RNU6-1088P-201ENST00000516850 LTBP3Q9NS15 1303 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 CYBBP04839 570 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 SOX9P48436 509 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 CORO7P57737 925 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 RBM10P98175 930 aaKnown RBP4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 TARBP2Q15633 366 aaKnown RBP4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 EEF1DP3Q658K8 133 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 NT5DC4Q86YG4 428 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 HOMEZQ8IX15 550 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 MARCH10Q8NA82 808 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 ADCY4Q8NFM4 1077 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 RASGRP4Q8TDF6 673 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 DACT3Q96B18 629 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 MRRFQ96E11 262 aaKnown RBP4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 HAUS7Q99871 368 aa4.8□□□□□ -1.64
RNU6-1088P-201ENST00000516850 IRS4O14654 1257 aaPredicted RBP4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 DBHP09172 617 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 IFNGR1P15260 489 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 GIPRP48546 466 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 SEPHS1P49903 392 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 NCKAP1LP55160 1127 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 AMPD2Q01433 879 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PLEKHN1Q494U1 663 aaPredicted RBP4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 ERICH6BQ5W0A0 696 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 FAM129CQ86XR2 697 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 C19orf47Q8N9M1 422 aaKnown RBP4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 NLGN2Q8NFZ4 835 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 RELTQ969Z4 430 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 FGD4Q96M96 766 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PWWP2AQ96N64 755 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 FAN1Q9Y2M0 1017 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PCDHA5Q9Y5H7 936 aa4.79□□□□□ -1.64
RNU6-1088P-201ENST00000516850 A0A1W2PQH9 124 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 F8W031 263 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PRRG2O14669 202 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 SRGAP3O43295 1099 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 CBFA2T2O43439 604 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 VAMP4O75379 141 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 MSL3P1P0C860 447 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 TACR1P25103 407 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 NASPP49321 788 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 CEBPAP49715 358 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 ZNF200P98182 395 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 VMACQ2NL98 169 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 DPY19L1Q2PZI1 675 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 C9orf131Q5VYM1 1079 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 RCSD1Q6JBY9 416 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 METTL16Q86W50 562 aaKnown RBP4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 IGDCC3Q8IVU1 814 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 SP8Q8IXZ3 490 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 TMEFF1Q8IYR6 380 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 USP33Q8TEY7 942 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 KCNC2Q96PR1 638 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 NUDT5Q9UKK9 219 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 PCDHB10Q9UN67 800 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 BACE2Q9Y5Z0 518 aa4.78□□□□□ -1.64
RNU6-1088P-201ENST00000516850 NCANO14594 1321 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 TRBV23OR9-2A0A075B6M9 112 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 C2orf71A6NGG8 1288 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 AURKAO14965 403 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 TRIM13O60858 407 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 EPHX1P07099 455 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 NAT2P11245 290 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 PAMP19021 973 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 NFIXQ14938 502 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 KIAA1211LQ6NV74 962 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 VHLLQ6RSH7 139 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 CRACR2BQ8N4Y2 399 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 SEC16BQ96JE7 1060 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 KLHL25Q9H0H3 589 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 STRIP2Q9ULQ0 834 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 INPP5FQ9Y2H2 1132 aa4.77□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ZC3H12DA2A288 527 aaKnown RBP4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 ANKRD34BA5PLL1 514 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 STXBP3O00186 592 aa4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 NOP56O00567 594 aaKnown RBP4.76□□□□□ -1.65
RNU6-1088P-201ENST00000516850 NCAM1P13591 858 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms