RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CLEC18CQ8NCF0 446 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 GPRC5AQ8NFJ5 357 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 MYL10Q9BUA6 226 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 FTOQ9C0B1 505 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 TXNRD2Q9NNW7 524 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 LIMD1Q9UGP4 676 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 SEPT3Q9UH03 358 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 AFG3L2Q9Y4W6 797 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 NBEAL2Q6ZNJ1 2754 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 PCLOQ9Y6V0 5065 aa4.35□□□□□ -1.71
SCARNA13-201ENST00000516672 HIVEP3Q5T1R4 2406 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 CCDC168Q8NDH2 2452 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 HIVEP1P15822 2718 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 F5H6K3 240 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 ADAMTS4O75173 837 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 LRRN2O75325 713 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 BAIAP3O94812 1187 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 GLP2RO95838 553 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 AFPP02771 609 aaKnown RBP4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 CSRP1P21291 193 aaKnown RBP4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 KCNA10Q16322 511 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 Q3C1V9 767 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 UBXN11Q5T124 520 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 HEATR6Q6AI08 1181 aaKnown RBP4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 LBX2Q6XYB7 198 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 CERS5Q8N5B7 392 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 EFHBQ8N7U6 833 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 HOOK2Q96ED9 719 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 MOCOSQ96EN8 888 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 SAMD11Q96NU1 681 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 ASCC2Q9H1I8 757 aaPredicted RBP4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 ZNF112Q9UJU3 913 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 DUSP12Q9UNI6 340 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 HEMK1Q9Y5R4 338 aaPredicted RBP4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 NUP98P52948 1817 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 PCSK5Q92824 1860 aa4.34□□□□□ -1.71
SCARNA13-201ENST00000516672 NOTCH1P46531 2555 aa4.34□□□□□ -1.72
SCARNA13-201ENST00000516672 ANKHD1Q8IWZ3 2542 aaKnown RBP4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 CACNA1IQ9P0X4 2223 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 RALGAPA1Q6GYQ0 2036 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 ERVV-1B6SEH8 477 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 DIAPH1O60610 1272 aaKnown RBP4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 C8AP07357 584 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 HOXC6P09630 235 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 ZNF806P0C7X5 589 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 KCNC3Q14003 757 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 TMEM192Q8IY95 271 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 DEFB124Q8NES8 71 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 LENG1Q96BZ8 264 aaPredicted RBP4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 WBP1Q96G27 269 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 GGNBP2Q9H3C7 697 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 PRR12Q9ULL5 1215 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 CA14Q9ULX7 337 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 MYO10Q9HD67 2058 aa4.33□□□□□ -1.72
SCARNA13-201ENST00000516672 MED23Q9ULK4 1368 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 SVILO95425 2214 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 MAP3K15Q6ZN16 1313 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 SLC15A5A6NIM6 579 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 C4orf47A7E2U8 309 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 H0Y626 953 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 FYB1O15117 783 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 GRM6O15303 877 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 GLRX3O76003 335 aaKnown RBP4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 TRIM16O95361 564 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 DRD2P14416 443 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 PTPRAP18433 802 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 PTPREP23469 700 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 ERVK-9P63128 1117 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 ERVK-24P63145 666 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 PABPC4Q13310 644 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 SIM2Q14190 667 aaPredicted RBP4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 PARP10Q53GL7 1025 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 DAB2IPQ5VWQ8 1189 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 OLFML2BQ68BL8 750 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 CCSAPQ6IQ19 270 aaPredicted RBP4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 KRT25Q7Z3Z0 450 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 ADGRD2Q7Z7M1 963 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 FBXO11Q86XK2 927 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 FAM26EQ8N5C1 309 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 NGEFQ8N5V2 710 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 FAM117AQ9C073 453 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 COA1Q9GZY4 146 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 LMAN2LQ9H0V9 348 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 TRPV6Q9H1D0 765 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 ARRDC1-AS1Q9H2J1 176 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 CDHR5Q9HBB8 845 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 DKK4Q9UBT3 224 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 SCN5AQ14524 2016 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 PTPRFP10586 1907 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 PATJQ8NI35 1801 aa4.32□□□□□ -1.72
SCARNA13-201ENST00000516672 SYNRGQ9UMZ2 1314 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 APC2O95996 2303 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 NIPBLQ6KC79 2804 aaeCLIP4.31□□□□□ -1.722e-70■□□□□ 8.7
SCARNA13-201ENST00000516672 SPAARA0A1B0GVQ0 90 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 MYADML2A6NDP7 307 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 NARSO43776 548 aaKnown RBP4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 ITGB2P05107 769 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 ASGR1P07306 291 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 RARAP10276 462 aa4.31□□□□□ -1.72
SCARNA13-201ENST00000516672 ATP2B4P23634 1241 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms