RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 LGI4Q8N135 537 aa3.06□□□□□ -1.92
RNU6-561P-201ENST00000516222 GOLM1Q8NBJ4 401 aa3.06□□□□□ -1.92
RNU6-561P-201ENST00000516222 GFOD1Q9NXC2 390 aa3.06□□□□□ -1.92
RNU6-561P-201ENST00000516222 DUSP10Q9Y6W6 482 aa3.06□□□□□ -1.92
RNU6-561P-201ENST00000516222 USP31Q70CQ4 1352 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 MINDY4BA8MYZ0 360 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 ATF2P15336 505 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 HTRA3P83110 453 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 AUHQ13825 339 aaKnown RBP3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 SURF1Q15526 300 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 CDCP2Q5VXM1 449 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 SH3RF3Q8TEJ3 882 aaPredicted RBP3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 RBM15Q96T37 977 aaKnown RBP eCLIP3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 RSRP1Q9BUV0 290 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 POLR3KQ9Y2Y1 108 aaPredicted RBP3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 PCDHB14Q9Y5E9 798 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 GTF3C3Q9Y5Q9 886 aa3.05□□□□□ -1.92
RNU6-561P-201ENST00000516222 ZBTB7AO95365 584 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 PLA2G1BP04054 148 aaKnown RBP3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 ASGR2P07307 311 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 L1CAMP32004 1257 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 FAM160A1Q05DH4 1040 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 TRIM26Q12899 539 aaPredicted RBP3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 TBC1D10BQ4KMP7 808 aaPredicted RBP3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 FAM196AQ6ZSG2 479 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 NLRC3Q7RTR2 1065 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 ZNF761Q86XN6 746 aaPredicted RBP3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 ZFPM1Q8IX07 1006 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 NLGN2Q8NFZ4 835 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 ZBTB8AQ96BR9 441 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 PEX11GQ96HA9 241 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 ZNF512BQ96KM6 892 aaPredicted RBP3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 CNNM2Q9H8M5 875 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 MRS2Q9HD23 443 aa3.04□□□□□ -1.92
RNU6-561P-201ENST00000516222 F6X3S4 739 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 DNAJA2O60884 412 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 ATE1O95260 518 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 RGL3Q3MIN7 710 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 CRTC3Q6UUV7 619 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 PLEKHH3Q7Z736 793 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 CCDC144CPQ8IYA2 1237 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 TMEM52Q8NDY8 209 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 ADAMTS17Q8TE56 1095 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 USP33Q8TEY7 942 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 CPA5Q8WXQ8 436 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 ARID3AQ99856 593 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 DEF6Q9H4E7 631 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 PARP2Q9UGN5 583 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 MINPP1Q9UNW1 487 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 SF3B6Q9Y3B4 125 aaKnown RBP3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 TSC22D4Q9Y3Q8 395 aa3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 SUPT16HQ9Y5B9 1047 aaKnown RBP3.03□□□□□ -1.92
RNU6-561P-201ENST00000516222 MROH6A6NGR9 719 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 PATL2C9JE40 543 aaKnown RBP3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 TLR3O15455 904 aaKnown RBP3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 CYP2C8P10632 490 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 FBLN1P23142 703 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 TACR1P25103 407 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 MCM4P33991 863 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 ACVRL1P37023 503 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 CTSKP43235 329 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 ZNF165P49910 485 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 DAB2P98082 770 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 POU4F1Q01851 419 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 KRTAP1-1Q07627 177 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 CACNB2Q08289 660 aaPredicted RBP3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 FAM26FQ5R3K3 315 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 OVOS1Q6IE37 1185 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 C7orf61Q8IZ16 206 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 SMARCC2Q8TAQ2 1214 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 ATG4CQ96DT6 458 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 DDX11Q96FC9 970 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 TSPAN17Q96FV3 270 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 RHOVQ96L33 236 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 SLC6A18Q96N87 628 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 SLC12A9Q9BXP2 914 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 SCAND2PQ9GZW5 306 aaPredicted RBP3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 VPS11Q9H270 941 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 BRMS1Q9HCU9 246 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 INVSQ9Y283 1065 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 IVNS1ABPQ9Y6Y0 642 aa3.02□□□□□ -1.93
RNU6-561P-201ENST00000516222 NPEPPSL1A6NEC2 478 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 SORBS3O60504 671 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 PMLP29590 882 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 POLR2BP30876 1174 aaKnown RBP3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 MC3RP41968 323 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 TGFB2P61812 414 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 KCNA1Q09470 495 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 RTP2Q5QGT7 225 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 SPRED1Q7Z699 444 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 C14orf37Q86TY3 774 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 REXO1Q8N1G1 1221 aaKnown RBP3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 LZTR1Q8N653 840 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 TTLL6Q8N841 843 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 NETO2Q8NC67 525 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 SMARCC1Q92922 1105 aaPredicted RBP3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 RNF34Q969K3 372 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 LCORQ96JN0 433 aaPredicted RBP3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 PTCHD1Q96NR3 888 aa3.01□□□□□ -1.93
RNU6-561P-201ENST00000516222 LRRC3Q9BY71 257 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms