RNA–Protein interactions for RNA: ENST00000515746.5

ATXN3-212, Transcript of ataxin 3, human

TSL 5

Gene ATXN3, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-212	ENST00000515746	PKN1	Q16512	942 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	TAF7L	Q5H9L4	462 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	EARS2	Q5JPH6	523 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZNF569	Q5MCW4	686 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZNF697	Q5TEC3	545 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	LDHAL6A	Q6ZMR3	332 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	KIF6	Q6ZMV9	814 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZNF662	Q6ZS27	426 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	TRAPPC11	Q7Z392	1133 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	IRF2BP1	Q8IU81	584 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZNF654	Q8IZM8	581 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	TMTC2	Q8N394	836 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	SPATA5	Q8NB90	893 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	FANCB	Q8NB91	859 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ACRBP	Q8NEB7	543 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	FAM71B	Q8TC56	605 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ADAMTS19	Q8TE59	1207 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ARAP2	Q8WZ64	1704 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	LPIN2	Q92539	896 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	DDX17	Q92841	729 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	AIDA	Q96BJ3	306 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	EPSTI1	Q96J88	318 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	CCDC85A	Q96PX6	553 aa	Predicted RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	CDC5L	Q99459	802 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	DNAJC7	Q99615	494 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	PHF20	Q9BVI0	1012 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	CARD10	Q9BWT7	1032 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	RNF26	Q9BY78	433 aa	Predicted RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	GBP3	Q9H0R5	595 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ARMT1	Q9H993	441 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	LZTFL1	Q9NQ48	299 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	CWC15	Q9P013	229 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	PUF60	Q9UHX1	559 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	RWDD2A	Q9UIY3	292 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	FAN1	Q9Y2M0	1017 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	RRP15	Q9Y3B9	282 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	MYH7	P12883	1935 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	NHSL1	Q5SYE7	1610 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	COL5A2	P05997	1499 aa	Predicted RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	RTL9	Q8NET4	1388 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	MROH5	Q6ZUA9	1318 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	TARSL2	A2RTX5	802 aa	Known RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CTAGE15	A4D2H0	777 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	MYO1C	O00159	1063 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	PRPF3	O43395	683 aa	Known RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	EIF3J	O75822	258 aa	Known RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	PRPF6	O94906	941 aa	Known RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	FGR	P09769	529 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CTAGE8	P0CG41	777 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	GNAT2	P19087	354 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CASP1	P29466	404 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CDC25A	P30304	524 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	NOP2	P46087	812 aa	Known RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	LMAN1	P49257	510 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	USP14	P54578	494 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	STX17	P56962	302 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	PIP4K2B	P78356	416 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	ATP2C1	P98194	919 aa	Predicted RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	SPAG1	Q07617	926 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	TRIM14	Q14142	442 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CASP8	Q14790	479 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	WTAP	Q15007	396 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	HLF	Q16534	295 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	IL17A	Q16552	155 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	KIF4B	Q2VIQ3	1234 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	NOM1	Q5C9Z4	860 aa	Known RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	PAPD7	Q5XG87	772 aa	Known RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	FOXR1	Q6PIV2	292 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CYP26C1	Q6V0L0	522 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	MFSD6	Q6ZSS7	791 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	SRL	Q86TD4	932 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CTAGE6	Q86UF2	777 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CTAGE4	Q8IX94	777 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	DNAJC10	Q8IXB1	793 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	SMYD4	Q8IYR2	804 aa	Predicted RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	LCORL	Q8N3X6	602 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	MAGEB6	Q8N7X4	407 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	FAM174A	Q8TBP5	190 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZNF507	Q8TCN5	953 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	MRGPRX2	Q96LB1	330 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	C1QTNF2	Q9BXJ5	285 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	NAPB	Q9H115	298 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZSWIM4	Q9H7M6	989 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	SUGCT	Q9HAC7	445 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CABP5	Q9NP86	173 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	MED4	Q9NPJ6	270 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	CNNM1	Q9NRU3	951 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	ABHD10	Q9NUJ1	306 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	VPS18	Q9P253	973 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	MYO6	Q9UM54	1294 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	SHANK3	Q9BYB0	1731 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	TOGARAM1	Q9Y4F4	1720 aa		5.6	□□□□□ -1.51
ATXN3-212	ENST00000515746	PLCH1	Q4KWH8	1693 aa		5.59	□□□□□ -1.51
ATXN3-212	ENST00000515746	SLIT2	O94813	1529 aa		5.59	□□□□□ -1.51
ATXN3-212	ENST00000515746		A0A1W2PQC6	194 aa		5.59	□□□□□ -1.51
ATXN3-212	ENST00000515746	LRRIQ3	A6PVS8	624 aa	Predicted RBP	5.59	□□□□□ -1.51
ATXN3-212	ENST00000515746	LGALS16	A8MUM7	142 aa		5.59	□□□□□ -1.51
ATXN3-212	ENST00000515746	IRS4	O14654	1257 aa	Predicted RBP	5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms