RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 PYM1Q9BRP8 204 aaKnown RBP22.86■■□□□ 1.25
TRIO-223ENST00000515710 ANO10Q9NW15 660 aa22.86■■□□□ 1.25
TRIO-223ENST00000515710 ANO6Q4KMQ2 910 aa22.85■■□□□ 1.25
TRIO-223ENST00000515710 CCDC84Q86UT8 332 aaPredicted RBP22.85■■□□□ 1.25
TRIO-223ENST00000515710 NAP1L4Q99733 375 aaKnown RBP22.85■■□□□ 1.25
TRIO-223ENST00000515710 RANBP17Q9H2T7 1088 aaKnown RBP22.85■■□□□ 1.25
TRIO-223ENST00000515710 AS3MTQ9HBK9 375 aa22.85■■□□□ 1.25
TRIO-223ENST00000515710 USP25Q9UHP3 1055 aa22.85■■□□□ 1.25
TRIO-223ENST00000515710 WDR46O15213 610 aaKnown RBP22.84■■□□□ 1.25
TRIO-223ENST00000515710 SNAP25P60880 206 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 IL17AQ16552 155 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 UBE2SQ16763 222 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 USP49Q70CQ1 688 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 SYMPKQ92797 1274 aaKnown RBP22.84■■□□□ 1.25
TRIO-223ENST00000515710 CCDC34Q96HJ3 373 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 EPSTI1Q96J88 318 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 WDR18Q9BV38 432 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.84■■□□□ 1.25
TRIO-223ENST00000515710 NEMFO60524 1076 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 USP14P54578 494 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 AP3B2Q13367 1082 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 WRNIP1Q96S55 665 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 TMEM60Q9H2L4 133 aa22.84■■□□□ 1.25
TRIO-223ENST00000515710 ZRSR1Q15695 479 aaKnown RBP22.83■■□□□ 1.25
TRIO-223ENST00000515710 PRAMEF18Q5VWM3 479 aa22.83■■□□□ 1.25
TRIO-223ENST00000515710 KIFC2Q96AC6 838 aa22.83■■□□□ 1.25
TRIO-223ENST00000515710 DCPSQ96C86 337 aaKnown RBP22.83■■□□□ 1.25
TRIO-223ENST00000515710 PICK1Q9NRD5 415 aa22.83■■□□□ 1.25
TRIO-223ENST00000515710 SERTAD1Q9UHV2 236 aa22.83■■□□□ 1.25
TRIO-223ENST00000515710 OR52Z1P0C646 297 aa22.82■■□□□ 1.24
TRIO-223ENST00000515710 CCDC173Q0VFZ6 552 aa22.82■■□□□ 1.24
TRIO-223ENST00000515710 PPP4R3AQ6IN85 833 aa22.82■■□□□ 1.24
TRIO-223ENST00000515710 KLRG1Q96E93 195 aa22.82■■□□□ 1.24
TRIO-223ENST00000515710 TUBE1Q9UJT0 475 aa22.82■■□□□ 1.24
TRIO-223ENST00000515710 FOSP01100 380 aaPredicted RBP22.82■■□□□ 1.24
TRIO-223ENST00000515710 USH1GQ495M9 461 aa22.82■■□□□ 1.24
TRIO-223ENST00000515710 L3MBTL3Q96JM7 780 aaPredicted RBP22.82■■□□□ 1.24
TRIO-223ENST00000515710 MEIS2O14770 477 aa22.81■■□□□ 1.24
TRIO-223ENST00000515710 ACTN4O43707 911 aaKnown RBP22.81■■□□□ 1.24
TRIO-223ENST00000515710 TXLNAP40222 546 aa22.81■■□□□ 1.24
TRIO-223ENST00000515710 MDM2Q00987 491 aaPredicted RBP22.81■■□□□ 1.24
TRIO-223ENST00000515710 DNAJC25Q9H1X3 360 aa22.81■■□□□ 1.24
TRIO-223ENST00000515710 ZC3H4Q9UPT8 1303 aaKnown RBP22.81■■□□□ 1.24
TRIO-223ENST00000515710 USP17L15C9J2P7 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L13C9JLJ4 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L11C9JVI0 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L18D6R9N7 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L22D6RA61 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L17D6RBQ6 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L19D6RCP7 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L20D6RJB6 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 GCFC2P16383 781 aaKnown RBP22.8■■□□□ 1.24
TRIO-223ENST00000515710 PTPRAP18433 802 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 ZNF165P49910 485 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L24Q0WX57 530 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 GPR162Q16538 588 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 NOL9Q5SY16 702 aaKnown RBP22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP17L6PQ6QN14 398 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 PDILTQ8N807 584 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 AK8Q96MA6 479 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 PPP1R9BQ96SB3 815 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 DOCK1Q14185 1865 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 EDIL3O43854 480 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 SLFN14P0C7P3 912 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP11P51784 963 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 NLRP12P59046 1061 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 USP50Q70EL3 339 aaPredicted RBP22.8■■□□□ 1.24
TRIO-223ENST00000515710 PRPF38AQ8NAV1 312 aaKnown RBP22.8■■□□□ 1.24
TRIO-223ENST00000515710 ERCC4Q92889 916 aaPredicted RBP22.8■■□□□ 1.24
TRIO-223ENST00000515710 ZKSCAN4Q969J2 545 aaPredicted RBP22.8■■□□□ 1.24
TRIO-223ENST00000515710 CBX8Q9HC52 389 aa22.8■■□□□ 1.24
TRIO-223ENST00000515710 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.79■■□□□ 1.24
TRIO-223ENST00000515710 GRIN3BO60391 1043 aa22.79■■□□□ 1.24
TRIO-223ENST00000515710 SULF1Q8IWU6 871 aa22.79■■□□□ 1.24
TRIO-223ENST00000515710 CEP57L1Q8IYX8 460 aa22.79■■□□□ 1.24
TRIO-223ENST00000515710 IQUBQ8NA54 791 aa22.79■■□□□ 1.24
TRIO-223ENST00000515710 ZNF280CQ8ND82 737 aa22.79■■□□□ 1.24
TRIO-223ENST00000515710 DHX58Q96C10 678 aa22.79■■□□□ 1.24
TRIO-223ENST00000515710 ANO3Q9BYT9 981 aa22.79■■□□□ 1.24
TRIO-223ENST00000515710 MRPL11Q9Y3B7 192 aaKnown RBP22.79■■□□□ 1.24
TRIO-223ENST00000515710 PIK3CDO00329 1044 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 SPP2Q13103 211 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 PNOCQ13519 176 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 POSTNQ15063 836 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 MTMR9Q96QG7 549 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 SLF1Q9BQI6 1058 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 NAT10Q9H0A0 1025 aaKnown RBP22.78■■□□□ 1.24
TRIO-223ENST00000515710 EMILIN3Q9NT22 766 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 ABCB11O95342 1321 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 A0A087X0B3 334 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 BACE1P56817 501 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 MTMR2Q13614 643 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 CALCRLQ16602 461 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 CCDC174Q6PII3 467 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 CCSER1Q9C0I3 900 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 FBXO28Q9NVF7 368 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 SSC5DA1L4H1 1573 aa22.78■■□□□ 1.24
TRIO-223ENST00000515710 C19orf81C9J6K1 198 aa22.77■■□□□ 1.24
TRIO-223ENST00000515710 USP2O75604 605 aaPredicted RBP22.77■■□□□ 1.24
TRIO-223ENST00000515710 MOXD1Q6UVY6 613 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms