RNA–Protein interactions for RNA: ENST00000515425.5

SH3TC2-215, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3TC2, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-215ENST00000515425 USP17L3A6NCW0 530 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 USP17L4A6NCW7 530 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 LGALS16A8MUM7 142 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 MYO1CO00159 1063 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 BUB1O43683 1085 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 ERVK-24P63145 666 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 RAPGEF1Q13905 1077 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 PFKFB3Q16875 520 aaPredicted RBP11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 CFAP58Q5T655 872 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 TPTE2Q6XPS3 522 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 TRIM58Q8NG06 486 aa11.33□□□□□ -0.6
SH3TC2-215ENST00000515425 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 ATP1A1P05023 1023 aaKnown RBP11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 PLCG1P19174 1290 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 PRDX5P30044 214 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 ARL6IP4Q66PJ3 421 aaKnown RBP11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 TMEM139Q8IV31 216 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 F8W031 263 aaPredicted RBP11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 H3BQF6 201 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 TTC19Q6DKK2 380 aaPredicted RBP11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 ZNF34Q8IZ26 560 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 MED1Q15648 1581 aaPredicted RBP11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 XDHP47989 1333 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 FGFR2P21802 821 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 PPP1R2P41236 205 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 NT5DC1Q5TFE4 455 aa11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 DHTKD1Q96HY7 919 aaPredicted RBP11.32□□□□□ -0.6
SH3TC2-215ENST00000515425 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 ZBED6P86452 979 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 BEND6Q5SZJ8 279 aaPredicted RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 CCDC84Q86UT8 332 aaPredicted RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 NELFCDQ8IXH7 590 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 REXO1Q8N1G1 1221 aaKnown RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 NOX5Q96PH1 765 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 THAP9Q9H5L6 903 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 DCP1AQ9NPI6 582 aaPredicted RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 CCNE1P24864 410 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 TROAPQ12815 778 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 CALCRLQ16602 461 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 ZSCAN29Q8IWY8 852 aaPredicted RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 ZNF622Q969S3 477 aaKnown RBP eCLIP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 MMS19Q96T76 1030 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 SLC7A5Q01650 507 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 PRPF4BQ13523 1007 aaKnown RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 CDKAL1Q5VV42 579 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 ADGRA1Q86SQ6 560 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
SH3TC2-215ENST00000515425 TRIM66O15016 1216 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 MOCS3O95396 460 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 PKN1Q16512 942 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 NDUFAB1O14561 156 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 ZNF76P36508 570 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 GTF2A1P52655 376 aaPredicted RBP11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 LRRC41Q15345 812 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 SEC23AQ15436 765 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 KRT26Q7Z3Y9 468 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 EYA3Q99504 573 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 ANKZF1Q9H8Y5 726 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 ITIH6Q6UXX5 1313 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 ZNF185O15231 689 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 RDXP35241 583 aaKnown RBP11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 USP14P54578 494 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 RASSF7Q02833 373 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 PTPROQ16827 1216 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 KRT27Q7Z3Y8 459 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 RIN2Q8WYP3 895 aaPredicted RBP11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 CELF1Q92879 486 aaKnown RBP11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 MINPP1Q9UNW1 487 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 HYOU1Q9Y4L1 999 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 ERLIN2O94905 339 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 EIF4A3P38919 411 aaKnown RBP11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 USP8P40818 1118 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 CCT5P48643 541 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 GUCY2FP51841 1108 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 MNAT1P51948 309 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 GNGT1P63211 74 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 DIXDC1Q155Q3 683 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 ZNF804AQ7Z570 1209 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 KLHL7Q8IXQ5 586 aa11.3□□□□□ -0.6
SH3TC2-215ENST00000515425 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms