RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MAP4K2Q12851 820 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 ZC3H12BQ5HYM0 836 aaKnown RBP7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 WAPLQ7Z5K2 1190 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 HOMER1Q86YM7 354 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 SCUBE1Q8IWY4 988 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 TMEM52Q8NDY8 209 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 APPBP2Q92624 585 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 DHRS4Q9BTZ2 278 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 ERVK13-1Q9NX77 482 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 PPP1R12AO14974 1030 aaPredicted RBP7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 C6orf222P0C671 652 aaPredicted RBP7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 FUT4P22083 530 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 RALGPS1Q5JS13 557 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 EGFLAMQ63HQ2 1017 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 FAM177A1Q8N128 213 aaPredicted RBP7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 KCTD13Q8WZ19 329 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 CCDC140Q96MF4 163 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 KRTAP9-2Q9BYQ4 174 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 ADAMTS10Q9H324 1103 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 PCMTD2Q9NV79 361 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 SLAMF8Q9P0V8 285 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 CLEC1BQ9P126 229 aa7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 TMEFF2Q9UIK5 374 aaPredicted RBP7.6□□□□□ -1.19
HMGCS1-207ENST00000514610 HYAL3O43820 417 aaPredicted RBP7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 ASMTLO95671 621 aa7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 PLS3P13797 630 aa7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 HSD3B2P26439 372 aa7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 SEPHS1P49903 392 aa7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 CBX2Q14781 532 aaPredicted RBP7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 PLEKHG4Q58EX7 1191 aa7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 CCDC103Q8IW40 242 aa7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 PTCHD1Q96NR3 888 aa7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 ADAMTS6Q9UKP5 1117 aa7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 ANGEL1Q9UNK9 670 aaKnown RBP7.59□□□□□ -1.19
HMGCS1-207ENST00000514610 CPP00450 1065 aa7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 ZGLP1P0C6A0 271 aa7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 SUMO1P63165 101 aaKnown RBP7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 LRP8Q14114 963 aa7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 EEF1DP3Q658K8 133 aa7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 MBLAC2Q68D91 279 aa7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 C16orf86Q6ZW13 317 aa7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 KIAA0907Q7Z7F0 614 aaPredicted RBP7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 FCRL2Q96LA5 508 aaPredicted RBP7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 ALPK1Q96QP1 1244 aa7.58□□□□□ -1.2
HMGCS1-207ENST00000514610 SCO2A0A1W2PP80 73 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 ZNF662Q6ZS27 426 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 KSR1Q8IVT5 923 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 PPIL6Q8IXY8 311 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 LINC01599Q8WXQ3 324 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 MAP6Q96JE9 813 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 HHIPL1Q96JK4 782 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 NCOA5Q9HCD5 579 aaKnown RBP7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 MBNL3Q9NUK0 354 aaKnown RBP7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 CD2APQ9Y5K6 639 aa7.57□□□□□ -1.2
HMGCS1-207ENST00000514610 ASXL2Q76L83 1435 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 CCDC163A0A0D9SF12 145 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 RAPGEF3O95398 923 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 WNT11O96014 354 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 ENDOUP21128 410 aaKnown RBP7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 TESK1Q15569 626 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 C21orf62-AS1Q17RA5 79 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 INF2Q27J81 1249 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 ACBD5Q5T8D3 534 aaPredicted RBP7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 SLC23A3Q6PIS1 610 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 USP53Q70EK8 1073 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 IPO9Q96P70 1041 aaKnown RBP7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 TMEM59LQ9UK28 342 aa7.56□□□□□ -1.2
HMGCS1-207ENST00000514610 FADS2P1A8MWK0 482 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 MEFVO15553 781 aaPredicted RBP7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 USP2O75604 605 aaPredicted RBP7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 LCP1P13796 627 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 PLCL1Q15111 1095 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 TCEA2Q15560 299 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 KCNT2Q6UVM3 1135 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 CPNE8Q86YQ8 564 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 TP53INP2Q8IXH6 220 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 NAT16Q8N8M0 369 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 CLUHP3Q96NS8 147 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 NPFFR2Q9Y5X5 522 aa7.55□□□□□ -1.2
HMGCS1-207ENST00000514610 NPHP3-ACAD11A0A0J9YXS1 232 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 NOTOA8MTQ0 251 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 PLD2O14939 933 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 EFEMP2O95967 443 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 PAMP19021 973 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 HK2P52789 917 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 LAPTM5Q13571 262 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 E4F1Q66K89 784 aaPredicted RBP7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 CYP2R1Q6VVX0 501 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 SLC7A14Q8TBB6 771 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 PI4K2BQ8TCG2 481 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 MMP19Q99542 508 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 FEZ1Q99689 392 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 MRPL4Q9BYD3 311 aaKnown RBP7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 SLC52A2Q9HAB3 445 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 SP110Q9HB58 689 aa7.54□□□□□ -1.2
HMGCS1-207ENST00000514610 TNFRSF10DQ9UBN6 386 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms