RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 ZNF605Q86T29 641 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 ANKLE2Q86XL3 938 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 ZNF513Q8N8E2 541 aaPredicted RBP6.77□□□□□ -1.33
MATR3-223ENST00000514402 NUP43Q8NFH3 380 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 NLGN2Q8NFZ4 835 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 JMJD8Q96S16 334 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 MCOLN1Q9GZU1 580 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 TNFRSF12AQ9NP84 129 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 BACE2Q9Y5Z0 518 aa6.77□□□□□ -1.33
MATR3-223ENST00000514402 A0A1W2PQ27 194 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 A0A1W2PQ64 194 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 A0A1W2PQC6 194 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 A0A1W2PQD8 194 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 SIRT2Q8IXJ6 389 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 BVESQ8NE79 360 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 KCNN1Q92952 543 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 CD320Q9NPF0 282 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 IMPACTQ9P2X3 320 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 AKT3Q9Y243 479 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 EMC9Q9Y3B6 208 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 MRVI1Q9Y6F6 885 aa6.76□□□□□ -1.33
MATR3-223ENST00000514402 MYOCOSA0A1B0GUC4 107 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 TCAF2A6NFQ2 919 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 NOP56O00567 594 aaKnown RBP6.75□□□□□ -1.33
MATR3-223ENST00000514402 C1QTNF9P0C862 333 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 DNAJA1P31689 397 aaKnown RBP6.75□□□□□ -1.33
MATR3-223ENST00000514402 L1CAMP32004 1257 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 ETFBP38117 255 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 SEPHS1P49903 392 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 ZC3H6P61129 1189 aaKnown RBP6.75□□□□□ -1.33
MATR3-223ENST00000514402 FZD5Q13467 585 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 FAM178BQ8IXR5 827 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 ZNF408Q9H9D4 720 aa6.75□□□□□ -1.33
MATR3-223ENST00000514402 C2orf71A6NGG8 1288 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
MATR3-223ENST00000514402 SRGAP3O43295 1099 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 GALK1P51570 392 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 MVKQ03426 396 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 CBX2Q14781 532 aaPredicted RBP6.74□□□□□ -1.33
MATR3-223ENST00000514402 NR1I3Q14994 352 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
MATR3-223ENST00000514402 C6orf15Q6UXA7 325 aaPredicted RBP6.74□□□□□ -1.33
MATR3-223ENST00000514402 CILP2Q8IUL8 1156 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 TRIM59Q8IWR1 403 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 ZSCAN18Q8TBC5 510 aaPredicted RBP6.74□□□□□ -1.33
MATR3-223ENST00000514402 EPN3Q9H201 632 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 PDLIM7Q9NR12 457 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 APEX2Q9UBZ4 518 aa6.74□□□□□ -1.33
MATR3-223ENST00000514402 STXBP3O00186 592 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 VAMP4O75379 141 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 PAMP19021 973 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 DLG4P78352 724 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 KCNA10Q16322 511 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 TMEM132EQ6IEE7 984 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 ATG14Q6ZNE5 492 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 COPS5Q92905 334 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 MCMBPQ9BTE3 642 aa6.73□□□□□ -1.33
MATR3-223ENST00000514402 R3HCC1Q9Y3T6 440 aaKnown RBP6.73□□□□□ -1.33
MATR3-223ENST00000514402 SUSD5O60279 629 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 CYBBP04839 570 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 SRSF3P84103 164 aaKnown RBP6.72□□□□□ -1.33
MATR3-223ENST00000514402 DPY19L1Q2PZI1 675 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 MRGPRX3Q96LB0 322 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 KCNK12Q9HB15 430 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 CYP26B1Q9NR63 512 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 KLHL14Q9P2G3 628 aa6.72□□□□□ -1.33
MATR3-223ENST00000514402 A0A1W2PQJ5 194 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 DDAH1O94760 285 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 KCNH1O95259 989 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 VIPR1P32241 457 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 KIR3DS1Q14943 382 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 RAB3GAP1Q15042 981 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 PAQR3Q6TCH7 311 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 EEPD1Q7L9B9 569 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 MMP19Q99542 508 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 NKX2-4Q9H2Z4 354 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 GCM1Q9NP62 436 aa6.71□□□□□ -1.34
MATR3-223ENST00000514402 MBD1Q9UIS9 605 aaPredicted RBP6.71□□□□□ -1.34
MATR3-223ENST00000514402 SMG5Q9UPR3 1016 aaKnown RBP6.71□□□□□ -1.34
MATR3-223ENST00000514402 NPHP3-ACAD11A0A0J9YXS1 232 aa6.7□□□□□ -1.34
MATR3-223ENST00000514402 MAPKAPK2P49137 400 aa6.7□□□□□ -1.34
MATR3-223ENST00000514402 GTF2IRD2BQ6EKJ0 949 aa6.7□□□□□ -1.34
MATR3-223ENST00000514402 GTF2IRD2Q86UP8 949 aa6.7□□□□□ -1.34
MATR3-223ENST00000514402 SIAH1Q8IUQ4 282 aa6.7□□□□□ -1.34
MATR3-223ENST00000514402 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
MATR3-223ENST00000514402 C8orf37Q96NL8 207 aa6.7□□□□□ -1.34
MATR3-223ENST00000514402 NPIPB6E9PJ23 425 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 N4BP3O15049 544 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 SCG5P05408 212 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 DBHP09172 617 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 MSL3P1P0C860 447 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 CFPP27918 469 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 HOXC12P31275 282 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 LINC00310P59036 64 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 SCRN1Q12765 414 aa6.69□□□□□ -1.34
MATR3-223ENST00000514402 E4F1Q66K89 784 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms