RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 KIAA1328Q86T90 577 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 PBXIP1Q96AQ6 731 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 E2F7Q96AV8 911 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 SKA1Q96BD8 255 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 ARL8AQ96BM9 186 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 ZMAT2Q96NC0 199 aaKnown RBP8.05□□□□□ -1.12
NIPBL-208ENST00000514335 MOGAT1Q96PD6 335 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 EIF2AK1Q9BQI3 630 aaKnown RBP8.05□□□□□ -1.12
NIPBL-208ENST00000514335 VRTNQ9H8Y1 702 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 CICQ96RK0 1608 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-208ENST00000514335 TRIM64A6NGJ6 449 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 TRIM64BA6NI03 449 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 B4GALT4O60513 344 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 STAMBPO95630 424 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 SMTNP53814 917 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 OXCT1P55809 520 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 GRAMD1BQ3KR37 738 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 PPP1R18Q6NYC8 613 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 DSTYKQ6XUX3 929 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 RASSF3Q86WH2 238 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 TRIM50Q86XT4 487 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 AADATQ8N5Z0 425 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 LPIN2Q92539 896 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 CTAGE1Q96RT6 745 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 TBCBQ99426 244 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 STK31Q9BXU1 1019 aa8.05□□□□□ -1.12
NIPBL-208ENST00000514335 FAM208AQ9UK61 1670 aaKnown RBP8.05□□□□□ -1.12
NIPBL-208ENST00000514335 PHRF1Q9P1Y6 1649 aaKnown RBP8.04□□□□□ -1.12
NIPBL-208ENST00000514335 A0A1W2PQ67 120 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 RAC2P15153 192 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 ETFBP38117 255 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 MTHFRP42898 656 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 KMT5BQ4FZB7 885 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 SLC30A9Q6PML9 568 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 C8orf76Q96K31 380 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 TRPC5Q9UL62 973 aaPredicted RBP8.04□□□□□ -1.12
NIPBL-208ENST00000514335 EPN2O95208 641 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 FESP07332 822 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 HNRNPCP07910 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
NIPBL-208ENST00000514335 ANXA13P27216 316 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 HSD17B2P37059 387 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 SEC13P55735 322 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 PCSK7Q16549 785 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 TMEM53Q6P2H8 277 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 FERMT3Q86UX7 667 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 CCDC144CPQ8IYA2 1237 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 GTF3C6Q969F1 213 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 CEP95Q96GE4 821 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 TCF12Q99081 682 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 AP1M1Q9BXS5 423 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 MIS18AQ9NYP9 233 aa8.04□□□□□ -1.12
NIPBL-208ENST00000514335 PA2G4Q9UQ80 394 aaKnown RBP8.04□□□□□ -1.12
NIPBL-208ENST00000514335 ANKRD50Q9ULJ7 1429 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 AHCYL1O43865 530 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 UBL4AP11441 157 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 ZFXP17010 805 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-208ENST00000514335 DNAJA1P31689 397 aaKnown RBP8.03□□□□□ -1.12
NIPBL-208ENST00000514335 GABREP78334 506 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 KLHL30Q0D2K2 578 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 NMIQ13287 307 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-208ENST00000514335 WDR45BQ5MNZ6 344 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 NEK5Q6P3R8 708 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 POMZP3Q6PJE2 187 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 PSKH2Q96QS6 385 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 THUMPD2Q9BTF0 503 aaKnown RBP8.03□□□□□ -1.12
NIPBL-208ENST00000514335 NSRP1Q9H0G5 558 aaKnown RBP8.03□□□□□ -1.12
NIPBL-208ENST00000514335 DKK3Q9UBP4 350 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 LAMP5Q9UJQ1 280 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 LMO7Q8WWI1 1683 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 IQCA1LA6NCM1 817 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 GOLGA8AA7E2F4 631 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 TSPAN1O60635 241 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 LTKP29376 864 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 WEE1P30291 646 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 CHKAP35790 457 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 CBX3Q13185 183 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 COG2Q14746 738 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 NAA30Q147X3 362 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-208ENST00000514335 BICDL1Q6ZP65 573 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 TBC1D9Q6ZT07 1266 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 CABP7Q86V35 215 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 NAT8LQ8N9F0 302 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 MSANTD4Q8NCY6 345 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 GORASP1Q9BQQ3 440 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 PLVAPQ9BX97 442 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 KCTD10Q9H3F6 313 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 CCPG1Q9ULG6 757 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 ARHGEF10O15013 1369 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 NPC1L1Q9UHC9 1359 aa8.03□□□□□ -1.12
NIPBL-208ENST00000514335 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 TTC34A8MYJ7 566 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 PLSCR1O15162 318 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 MGEA5O60502 916 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 ARIH2O95376 493 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 ALAS2P22557 587 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 SCNN1AP37088 669 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 HAAOP46952 286 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 ITGA7Q13683 1181 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 SH3BP5LQ7L8J4 393 aa8.02□□□□□ -1.12
NIPBL-208ENST00000514335 SLC44A2Q8IWA5 706 aaPredicted RBP8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms