RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ETFB	P38117	255 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CTSK	P43235	329 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	YBX1	P67809	324 aa	Known RBP	5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NCAPH	Q15003	741 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	HSF5	Q4G112	596 aa	Predicted RBP	5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TIGD5	Q53EQ6	642 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ADGRF1	Q5T601	910 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	EEF1DP3	Q658K8	133 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	RCSD1	Q6JBY9	416 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CRTC3	Q6UUV7	619 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ATG14	Q6ZNE5	492 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ANKS3	Q6ZW76	656 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SLCO6A1	Q86UG4	719 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	AMIGO3	Q86WK7	504 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ANKRD13A	Q8IZ07	590 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SHISA4	Q96DD7	197 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	HAUS7	Q99871	368 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TRIM55	Q9BYV6	548 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SIRT5	Q9NXA8	310 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	RAPGEFL1	Q9UHV5	662 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ACSL6	Q9UKU0	697 aa		5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	GPR55	Q9Y2T6	319 aa	Predicted RBP	5	□□□□□ -1.61
CALCOCO2-223	ENST00000514267		A0A1W2PQJ5	194 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ANKRD34B	A5PLL1	514 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267		C9IYK1	514 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ETV2	O00321	342 aa	Predicted RBP	4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PPM1G	O15355	546 aa	Predicted RBP	4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CLSTN1	O94985	981 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	GSTM1	P09488	218 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	HSD3B2	P26439	372 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ZNF445	P59923	1031 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	DLG4	P78352	724 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CYP4F8	P98187	520 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	EGFLAM	Q63HQ2	1017 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CABP7	Q86V35	215 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PPFIBP1	Q86W92	1011 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NLGN1	Q8N2Q7	840 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	RCC1L	Q96I51	464 aa	Known RBP	4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SHD	Q96IW2	340 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SLC12A9	Q9BXP2	914 aa		4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.99	□□□□□ -1.61
CALCOCO2-223	ENST00000514267		A0A1W2PQH9	124 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	FAM86C2P	A6NEL3	165 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SRGAP3	O43295	1099 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NUAK1	O60285	661 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	LINC00310	P59036	64 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CBX2	Q14781	532 aa	Predicted RBP	4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TDRD10	Q5VZ19	366 aa	Known RBP	4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CCDC81	Q6ZN84	652 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NUP43	Q8NFH3	380 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NLGN2	Q8NFZ4	835 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	MCOLN1	Q9GZU1	580 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TMX1	Q9H3N1	280 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	AP5S1	Q9NUS5	200 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SMG5	Q9UPR3	1016 aa	Known RBP	4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ZNF451	Q9Y4E5	1061 aa		4.98	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NOTO	A8MTQ0	251 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NPIPB6	E9PJ23	425 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267		H0Y8X5	98 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ENPP3	O14638	875 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	FGF10	O15520	208 aa	Predicted RBP	4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TP53	P04637	393 aa	Predicted RBP	4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CYBB	P04839	570 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PRKCA	P17252	672 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	L1CAM	P32004	1257 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SRSF3	P84103	164 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	AMPD2	Q01433	879 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	TARBP2	Q15633	366 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	FBLN7	Q53RD9	439 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	RTP2	Q5QGT7	225 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	DCAF15	Q66K64	600 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ADAT2	Q7Z6V5	191 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	JAZF1	Q86VZ6	243 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	ANAPC16	Q96DE5	110 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SIGLEC10	Q96LC7	697 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PTCHD1	Q96NR3	888 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SRPK1	Q96SB4	655 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	KLHL25	Q9H0H3	589 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CCDC113	Q9H0I3	377 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	NOL6	Q9H6R4	1146 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	PDLIM7	Q9NR12	457 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	EBF1	Q9UH73	591 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	CNOT6	Q9ULM6	557 aa	Known RBP	4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	IRAK3	Q9Y616	596 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	MRVI1	Q9Y6F6	885 aa		4.97	□□□□□ -1.61
CALCOCO2-223	ENST00000514267	SBNO2	Q9Y2G9	1366 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	NOP56	O00567	594 aa	Known RBP	4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	CBFA2T2	O43439	604 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	CD3E	P07766	207 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	ZSCAN22	P10073	491 aa	Predicted RBP	4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	PFKL	P17858	780 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	CFP	P27918	469 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	MAPKAPK2	P49137	400 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	SEPHS1	P49903	392 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	RAB3GAP1	Q15042	981 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	ZYX	Q15942	572 aa	Known RBP	4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	PPP2R5E	Q16537	467 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	TCERG1L	Q5VWI1	586 aa		4.96	□□□□□ -1.62
CALCOCO2-223	ENST00000514267	VHLL	Q6RSH7	139 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms