RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 FSCN1Q16658 493 aaKnown RBP16.65■□□□□ 0.26
SPCS3-204ENST00000513139 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 SBK1Q52WX2 424 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 FAM133AQ8N9E0 248 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 MKL1Q969V6 931 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 KIFC2Q96AC6 838 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 WNT8AQ9H1J5 351 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 COG5Q9UP83 839 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 ASTN1O14525 1302 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 GRIN2DO15399 1336 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
SPCS3-204ENST00000513139 ASB14A6NK59 587 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 GTPBP6O43824 516 aaPredicted RBP16.64■□□□□ 0.25
SPCS3-204ENST00000513139 B4GALT4O60513 344 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 PRR29P0C7W0 189 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 KCNQ1P51787 676 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
SPCS3-204ENST00000513139 TLK2Q86UE8 772 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 MICALL1Q8N3F8 863 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 HAUS7Q99871 368 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 LRFN3Q9BTN0 628 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 AP5M1Q9H0R1 490 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 Q9Y3F1 56 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 MTCH2Q9Y6C9 303 aa16.64■□□□□ 0.25
SPCS3-204ENST00000513139 MYOGP15173 224 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 SKIV2LQ15477 1246 aaKnown RBP16.63■□□□□ 0.25
SPCS3-204ENST00000513139 TMEM67Q5HYA8 995 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 GIMAP6Q6P9H5 292 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 RPAP2Q8IXW5 612 aaPredicted RBP16.63■□□□□ 0.25
SPCS3-204ENST00000513139 VWCEQ96DN2 955 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 AGBL1Q96MI9 1066 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 TRPV6Q9H1D0 765 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 BOLA2Q9H3K6 86 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 CLIP2Q9UDT6 1046 aa16.63■□□□□ 0.25
SPCS3-204ENST00000513139 LCTP09848 1927 aa16.62■□□□□ 0.25
SPCS3-204ENST00000513139 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
SPCS3-204ENST00000513139 ZBBXA8MT70 800 aa16.62■□□□□ 0.25
SPCS3-204ENST00000513139 IQSEC1Q6DN90 963 aa16.62■□□□□ 0.25
SPCS3-204ENST00000513139 TANC1Q9C0D5 1861 aa16.62■□□□□ 0.25
SPCS3-204ENST00000513139 TRIP12Q14669 1992 aaPredicted RBP16.62■□□□□ 0.25
SPCS3-204ENST00000513139 SCN10AQ9Y5Y9 1956 aa16.62■□□□□ 0.25
SPCS3-204ENST00000513139 TET1Q8NFU7 2136 aa16.61■□□□□ 0.25
SPCS3-204ENST00000513139 TLL1O43897 1013 aa16.61■□□□□ 0.25
SPCS3-204ENST00000513139 RAB11FIP3O75154 756 aa16.61■□□□□ 0.25
SPCS3-204ENST00000513139 SUPT20HL2P0C7V6 817 aa16.61■□□□□ 0.25
SPCS3-204ENST00000513139 TMEM31Q5JXX7 168 aa16.61■□□□□ 0.25
SPCS3-204ENST00000513139 GMCL1P1Q8NEA9 526 aa16.61■□□□□ 0.25
SPCS3-204ENST00000513139 PUS7LQ9H0K6 701 aaKnown RBP16.61■□□□□ 0.25
SPCS3-204ENST00000513139 ALDH8A1Q9H2A2 487 aaPredicted RBP16.61■□□□□ 0.25
SPCS3-204ENST00000513139 EPHX3Q9H6B9 360 aa16.61■□□□□ 0.25
SPCS3-204ENST00000513139 ZNF287Q9HBT7 754 aa16.61■□□□□ 0.25
SPCS3-204ENST00000513139 A1CFQ9NQ94 594 aaKnown RBP16.61■□□□□ 0.25
SPCS3-204ENST00000513139 SOWAHBA6NEL2 793 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
SPCS3-204ENST00000513139 HMMRO75330 724 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 CA3P07451 260 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 SMPD1P17405 629 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 TKFCQ3LXA3 575 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 PHOSPHO2Q8TCD6 241 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 SCLYQ96I15 445 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 STRBPQ96SI9 672 aaKnown RBP16.6■□□□□ 0.25
SPCS3-204ENST00000513139 HOMER2Q9NSB8 354 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 COG6Q9Y2V7 657 aa16.6■□□□□ 0.25
SPCS3-204ENST00000513139 PTPRSQ13332 1948 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 GSG1L2A8MUP6 293 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 GPR37L1O60883 481 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 TTLL1O95922 423 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 CHGBP05060 677 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 BMP3P12645 472 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 ACTN1P12814 892 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 TAPT1Q6NXT6 567 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 ZNF444Q8N0Y2 327 aaPredicted RBP16.59■□□□□ 0.25
SPCS3-204ENST00000513139 HLA-CQ95604 372 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 CEP95Q96GE4 821 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 SLC9A7Q96T83 725 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
SPCS3-204ENST00000513139 RFXAPO00287 272 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 RFC2P35250 354 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 STAT2P52630 851 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 PSMC6P62333 389 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 FAM160B2Q86V87 743 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 CHURC1Q8WUH1 139 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 VTA1Q9NP79 307 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 POLR3EQ9NVU0 708 aa16.58■□□□□ 0.24
SPCS3-204ENST00000513139 COL4A4P53420 1690 aaPredicted RBP16.58■□□□□ 0.24
SPCS3-204ENST00000513139 PLIN4Q96Q06 1357 aa16.57■□□□□ 0.24
SPCS3-204ENST00000513139 ZNF536O15090 1300 aa16.57■□□□□ 0.24
SPCS3-204ENST00000513139 TNKSO95271 1327 aa16.57■□□□□ 0.24
SPCS3-204ENST00000513139 MINDY4BA8MYZ0 360 aa16.57■□□□□ 0.24
SPCS3-204ENST00000513139 PLA2G6O60733 806 aa16.57■□□□□ 0.24
SPCS3-204ENST00000513139 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
SPCS3-204ENST00000513139 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
SPCS3-204ENST00000513139 PDGFCQ9NRA1 345 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms