RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 GNASQ5JWF2 1037 aa17.34■□□□□ 0.37
CCHCR1-229ENST00000512418 BTNL9Q6UXG8 535 aa17.34■□□□□ 0.37
CCHCR1-229ENST00000512418 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
CCHCR1-229ENST00000512418 RANBP17Q9H2T7 1088 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-229ENST00000512418 A0A0C4DFX4 3053 aa17.33■□□□□ 0.37
CCHCR1-229ENST00000512418 ASTN1O14525 1302 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 A0A0U1RQG5 324 aaPredicted RBP17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 MFAP1P55081 439 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 HAND2P61296 217 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 SMAD3P84022 425 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 TNFAIP2Q03169 654 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 FPGSQ05932 587 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 AKNAD1Q5T1N1 836 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 CHD1LQ86WJ1 897 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 GUCD1Q96NT3 240 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 TBX21Q9UL17 535 aa17.33■□□□□ 0.36
CCHCR1-229ENST00000512418 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 CTAGE5O15320 804 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 PDHBP11177 359 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 SDSP20132 328 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 SLC16A2P36021 539 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 CDK7P50613 346 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 SYDE2Q5VT97 1194 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 NSMFQ6X4W1 530 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 MFSD6Q6ZSS7 791 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 NOL8Q76FK4 1167 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 TLK2Q86UE8 772 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 VTI1AQ96AJ9 217 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 RNPC3Q96LT9 517 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 YTHDC1Q96MU7 727 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 FAM161BQ96MY7 647 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 TTC14Q96N46 770 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 RNF41Q9H4P4 317 aaPredicted RBP17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 GNEQ9Y223 722 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-229ENST00000512418 CDH23Q9H251 3354 aa17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 LCTP09848 1927 aa17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 FRMPD2Q68DX3 1309 aaPredicted RBP17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 ARVCFO00192 962 aa17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 TIMP1P01033 207 aa17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 EPHB4P54760 987 aa17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 NUCB1Q02818 461 aa17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 TBC1D10CQ8IV04 446 aa17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 PLEKHM2Q8IWE5 1019 aa17.31■□□□□ 0.36
CCHCR1-229ENST00000512418 UNC80Q8N2C7 3258 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 TLR3O15455 904 aaKnown RBP17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 NT5C2P49902 561 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 BEX3Q00994 111 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 FBXO16Q8IX29 292 aaPredicted RBP17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 FAM126BQ8IXS8 530 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 MORC4Q8TE76 937 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 ESR2Q92731 530 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 AP5M1Q9H0R1 490 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 VTA1Q9NP79 307 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 GPCPD1Q9NPB8 672 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 ADD3Q9UEY8 706 aaKnown RBP17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 PNMA2Q9UL42 364 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 LAMA4Q16363 1823 aa17.3■□□□□ 0.36
CCHCR1-229ENST00000512418 LOC102724159A0A0B4J2E5 919 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 NFIBO00712 420 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 CABYRO75952 493 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 IGHDP01880 384 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 SMPD1P17405 629 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 BAATQ14032 418 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 PWP2Q15269 919 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 FSCN1Q16658 493 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 IQSEC1Q6DN90 963 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 MFSD5Q6N075 450 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 TAPT1Q6NXT6 567 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 Q9Y3F1 56 aa17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-229ENST00000512418 NEDD4P46934 1319 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 HIP1O00291 1037 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 DLL1O00548 723 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 ZNF213O14771 459 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 ZEB2O60315 1214 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 SNHG28P0DPA3 235 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 ALDH5A1P51649 535 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 CWC27Q6UX04 472 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 CXCL17Q6UXB2 119 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 PURBQ96QR8 312 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 SEMA6BQ9H3T3 888 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 PDGFCQ9NRA1 345 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 DIAPH3Q9NSV4 1193 aa17.28■□□□□ 0.36
CCHCR1-229ENST00000512418 WDR19Q8NEZ3 1342 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 EYSQ5T1H1 3165 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 TMEM265A0A087WTH1 108 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 PTPDC1A2A3K4 754 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 DYNC1LI2O43237 492 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 PPIGQ13427 754 aaKnown RBP eCLIP17.27■□□□□ 0.365e-7■■■■□ 20.4
CCHCR1-229ENST00000512418 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 DGKHQ86XP1 1220 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 TMEM199Q8N511 208 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 SLC43A3Q8NBI5 491 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms