RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 TRIM9Q9C026 710 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 LZTFL1Q9NQ48 299 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 SPATA31A6Q5VVP1 1343 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 BICDL2A1A5D9 508 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 PP2D1A8MPX8 630 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 GOLGA8HP0CJ92 632 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 PNMA6AP0CW24 399 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-210ENST00000512332 DNM2P50570 870 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 TXNRD1Q16881 649 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 MFSD14BQ5SR56 506 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 SOGA3Q5TF21 947 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 ZNF662Q6ZS27 426 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 SRGAP1Q7Z6B7 1085 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 CEP112Q8N8E3 955 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 CAPN11Q9UMQ6 739 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 C10orf71Q711Q0 1435 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
CPNE4-210ENST00000512332 RNF225M0QZC1 329 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-210ENST00000512332 CCNT1O60563 726 aaKnown RBP10.37□□□□□ -0.75
CPNE4-210ENST00000512332 SERPINB2P05120 415 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 SNHG28P0DPA3 235 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 GYS1P13807 737 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 PLCG1P19174 1290 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 CCNE1P24864 410 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 USP17L2Q6R6M4 530 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 FAM114A1Q8IWE2 563 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 IQCDQ96DY2 449 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 NUP58Q9BVL2 599 aa10.37□□□□□ -0.75
CPNE4-210ENST00000512332 IRX2Q9BZI1 471 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-210ENST00000512332 MAGEC2Q9UBF1 373 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-210ENST00000512332 EPN1Q9Y6I3 576 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-210ENST00000512332 MYO3BQ8WXR4 1341 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 CTAGE9A4FU28 777 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 COBLO75128 1261 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 SRGNP10124 158 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 ARHGAP25P42331 645 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
CPNE4-210ENST00000512332 GABPAQ06546 454 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 PDIA5Q14554 519 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 TERF2Q15554 542 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 LETM2Q2VYF4 491 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 ASPRV1Q53RT3 343 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 SLC51AQ86UW1 340 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 REXO1Q8N1G1 1221 aaKnown RBP10.36□□□□□ -0.75
CPNE4-210ENST00000512332 LRRC15Q8TF66 581 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 P2RX5Q93086 422 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
CPNE4-210ENST00000512332 MTMR9Q96QG7 549 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 DUSP9Q99956 384 aaKnown RBP10.36□□□□□ -0.75
CPNE4-210ENST00000512332 LRRC4BQ9NT99 713 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 MTMR4Q9NYA4 1195 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 POLLQ9UGP5 575 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 MAPK8IP1Q9UQF2 711 aa10.36□□□□□ -0.75
CPNE4-210ENST00000512332 LUC7L2Q9Y383 392 aaKnown RBP10.36□□□□□ -0.75
CPNE4-210ENST00000512332 IGKV6D-41A0A0C4DH26 115 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 TTC26A0AVF1 554 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 TRIM49BA6NDI0 452 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 POTEB2H3BUK9 544 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 PDHBP11177 359 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
CPNE4-210ENST00000512332 MEA1Q16626 185 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 FIGNQ5HY92 759 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 ZNF569Q5MCW4 686 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 CC2D1AQ6P1N0 951 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-210ENST00000512332 ZSCAN29Q8IWY8 852 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-210ENST00000512332 TBCKQ8TEA7 893 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 GJD4Q96KN9 370 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-210ENST00000512332 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 PIGSQ96S52 555 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 MMTAG2Q9BU76 263 aaKnown RBP10.35□□□□□ -0.75
CPNE4-210ENST00000512332 STK17AQ9UEE5 414 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 MYH1P12882 1939 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 PVALEFA0A1B0GWK0 134 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 CCDC151A5D8V7 595 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 NDUFA10O95299 355 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 TUBBP07437 444 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 HMGB2P26583 209 aaKnown RBP10.35□□□□□ -0.75
CPNE4-210ENST00000512332 CHMP4BP1P59074 171 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 BRD3Q15059 726 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 WHAMMP3Q1A5X7 153 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
CPNE4-210ENST00000512332 FAM182BQ5T319 152 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 CNNM4Q6P4Q7 775 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 FOXR2Q6PJQ5 311 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 SP8Q8IXZ3 490 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 CSGALNACT2Q8N6G5 542 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 ACRBPQ8NEB7 543 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 HNRNPLLQ8WVV9 542 aaKnown RBP10.35□□□□□ -0.75
CPNE4-210ENST00000512332 CALML4Q96GE6 196 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 PARD6BQ9BYG5 372 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 UBXN6Q9BZV1 441 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 HAUS4Q9H6D7 363 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 EXOC1Q9NV70 894 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 FOCADQ5VW36 1801 aa10.35□□□□□ -0.75
CPNE4-210ENST00000512332 USP17L5A8MUK1 530 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 PLA2G4AP47712 749 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 CDK17Q00537 523 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms