RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 USP17L18D6R9N7 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP17L22D6RA61 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP17L17D6RBQ6 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP17L19D6RCP7 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP17L20D6RJB6 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 JAK2O60674 1132 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 PDIA3P30101 505 aaKnown RBP6.29□□□□□ -1.4
PROM1-211ENST00000511153 METAP2P50579 478 aaKnown RBP eCLIP6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP14P54578 494 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 ANAPC15P60006 121 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 ZNF543Q08ER8 600 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 USP17L24Q0WX57 530 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 ST3GAL1Q11201 340 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 RABEP1Q15276 862 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 ME3Q16798 604 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 Q3C1V9 767 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 SYDE2Q5VT97 1194 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 CATSPERGQ6ZRH7 1159 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 FASTKD5Q7L8L6 764 aaKnown RBP6.29□□□□□ -1.4
PROM1-211ENST00000511153 SRBD1Q8N5C6 995 aaKnown RBP6.29□□□□□ -1.4
PROM1-211ENST00000511153 CTCFLQ8NI51 663 aaPredicted RBP6.29□□□□□ -1.4
PROM1-211ENST00000511153 AGBL1Q96MI9 1066 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 SLC26A6Q9BXS9 759 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 TM6SF1Q9BZW5 370 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 ARHGAP39Q9C0H5 1083 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 SLKQ9H2G2 1235 aaPredicted RBP6.29□□□□□ -1.4
PROM1-211ENST00000511153 TXNRD2Q9NNW7 524 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 RNF186Q9NXI6 227 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 BTBD7Q9P203 1132 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 MAD2L2Q9UI95 211 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 PRR12Q9ULL5 1215 aa6.29□□□□□ -1.4
PROM1-211ENST00000511153 CTDP1Q9Y5B0 961 aaPredicted RBP6.29□□□□□ -1.4
PROM1-211ENST00000511153 DDX49Q9Y6V7 483 aaKnown RBP6.29□□□□□ -1.4
PROM1-211ENST00000511153 WDR46O15213 610 aaKnown RBP6.28□□□□□ -1.4
PROM1-211ENST00000511153 CYTH3O43739 400 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 RNF40O75150 1001 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 NOVP48745 357 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 HERVK_113P62684 666 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 CAP1Q01518 475 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 GUCY1B3Q02153 619 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 SCRN1Q12765 414 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 SREBF2Q12772 1141 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 TROAPQ12815 778 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 GRM4Q14833 912 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 CDC37Q16543 378 aaPredicted RBP6.28□□□□□ -1.4
PROM1-211ENST00000511153 SH3D19Q5HYK7 790 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 ADGRF4Q8IZF3 695 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 FANCBQ8NB91 859 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 PROCA1Q8NCQ7 364 aaPredicted RBP6.28□□□□□ -1.4
PROM1-211ENST00000511153 GMCL1P1Q8NEA9 526 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 DCAF4Q8WV16 495 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 ANKS1AQ92625 1134 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 GPKOWQ92917 476 aaPredicted RBP eCLIP6.28□□□□□ -1.4
PROM1-211ENST00000511153 MKL1Q969V6 931 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 COA7Q96BR5 231 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 HHIPL1Q96JK4 782 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 AIFM3Q96NN9 605 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 PIGSQ96S52 555 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 SLF1Q9BQI6 1058 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 ZMYND15Q9H091 742 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 GJB4Q9NTQ9 266 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 GINM1Q9NU53 330 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 CASP8AP2Q9UKL3 1982 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 RLFQ13129 1914 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 PARP14Q460N5 1801 aa6.28□□□□□ -1.4
PROM1-211ENST00000511153 DOCK3Q8IZD9 2030 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 ADAMTS3O15072 1205 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 EPB41L2O43491 1005 aaKnown RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 EIF5BO60841 1220 aaKnown RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 PPP1R11O60927 126 aaPredicted RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 CNMDO75829 334 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 DDAH1O94760 285 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 MYCP01106 439 aaPredicted RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 HSPA1AP0DMV8 641 aaKnown RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 HSPA1BP0DMV9 641 aaKnown RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 ALAS1P13196 640 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CD46P15529 392 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 LIFRP42702 1097 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 STAT2P52630 851 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 COG2Q14746 738 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 TMEM132BQ14DG7 1078 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CCDC178Q5BJE1 867 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 HEATR3Q7Z4Q2 680 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 ANKRD23Q86SG2 305 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 NCAPG2Q86XI2 1143 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 RDH13Q8NBN7 331 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 LPAR1Q92633 364 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 GMCL1Q96IK5 515 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 C12orf42Q96LP6 360 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 PURBQ96QR8 312 aaKnown RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 PARK7Q99497 189 aaKnown RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 TBC1D2Q9BYX2 928 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 PORCNQ9H237 461 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 JMJD4Q9H9V9 463 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 EFCC1Q9HA90 598 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 ZFYVE28Q9HCC9 887 aa6.27□□□□□ -1.41
PROM1-211ENST00000511153 CWC22Q9HCG8 908 aaKnown RBP6.27□□□□□ -1.41
PROM1-211ENST00000511153 RBPJLQ9UBG7 517 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms