RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 MORC4Q8TE76 937 aa27.08■■□□□ 1.93
SMAD5-207ENST00000511116 ZNF576Q9H609 170 aa27.08■■□□□ 1.93
SMAD5-207ENST00000511116 CYP39A1Q9NYL5 469 aa27.08■■□□□ 1.93
SMAD5-207ENST00000511116 PRR12Q9ULL5 1215 aa27.08■■□□□ 1.93
SMAD5-207ENST00000511116 TLR3O15455 904 aaKnown RBP27.07■■□□□ 1.92
SMAD5-207ENST00000511116 BEX3Q00994 111 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 PSRC1Q6PGN9 363 aaPredicted RBP27.07■■□□□ 1.92
SMAD5-207ENST00000511116 CCDC129Q6ZRS4 1044 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 KCTD1Q719H9 257 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 VTI1AQ96AJ9 217 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 TIFAQ96CG3 184 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 SEZ6LQ9BYH1 1024 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 STX8Q9UNK0 236 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 Q9Y3F1 56 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 MUC3AQ02505 3323 aa27.07■■□□□ 1.92
SMAD5-207ENST00000511116 TSPY2A6NKD2 308 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 ORC4O43929 436 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 NMT2O60551 498 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 ALAS1P13196 640 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 CTDSPL2Q05D32 466 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 MUM1L1Q5H9M0 696 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 TAPT1Q6NXT6 567 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 RASGRP2Q7LDG7 609 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 TLK2Q86UE8 772 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 INCENPQ9NQS7 918 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 GRIN2DO15399 1336 aa27.06■■□□□ 1.92
SMAD5-207ENST00000511116 SMPD1P17405 629 aa27.05■■□□□ 1.92
SMAD5-207ENST00000511116 IKQ13123 557 aaPredicted RBP27.05■■□□□ 1.92
SMAD5-207ENST00000511116 ALX1Q15699 326 aa27.05■■□□□ 1.92
SMAD5-207ENST00000511116 FSCN1Q16658 493 aaKnown RBP27.05■■□□□ 1.92
SMAD5-207ENST00000511116 IQSEC1Q6DN90 963 aa27.05■■□□□ 1.92
SMAD5-207ENST00000511116 CXCL17Q6UXB2 119 aa27.05■■□□□ 1.92
SMAD5-207ENST00000511116 BTNL9Q6UXG8 535 aa27.05■■□□□ 1.92
SMAD5-207ENST00000511116 PBX4Q9BYU1 374 aa27.05■■□□□ 1.92
SMAD5-207ENST00000511116 PPP1R12CQ9BZL4 782 aa27.05■■□□□ 1.92
SMAD5-207ENST00000511116 CHD7Q9P2D1 2997 aa27.04■■□□□ 1.92
SMAD5-207ENST00000511116 MYO9BQ13459 2157 aa27.04■■□□□ 1.92
SMAD5-207ENST00000511116 ICAM1P05362 532 aa27.04■■□□□ 1.92
SMAD5-207ENST00000511116 ZNF365Q70YC5 407 aa27.04■■□□□ 1.92
SMAD5-207ENST00000511116 DCAF4Q8WV16 495 aa27.04■■□□□ 1.92
SMAD5-207ENST00000511116 HERVK_113Q902F9 699 aa27.04■■□□□ 1.92
SMAD5-207ENST00000511116 RANBP17Q9H2T7 1088 aaKnown RBP27.04■■□□□ 1.92
SMAD5-207ENST00000511116 IL23AQ9NPF7 189 aa27.04■■□□□ 1.92
SMAD5-207ENST00000511116 ISY1Q9ULR0 285 aaKnown RBP27.04■■□□□ 1.92
SMAD5-207ENST00000511116 CYP2C18P33260 490 aa27.03■■□□□ 1.92
SMAD5-207ENST00000511116 ITGA7Q13683 1181 aa27.03■■□□□ 1.92
SMAD5-207ENST00000511116 VPS53Q5VIR6 699 aa27.03■■□□□ 1.92
SMAD5-207ENST00000511116 USP38Q8NB14 1042 aa27.03■■□□□ 1.92
SMAD5-207ENST00000511116 VTA1Q9NP79 307 aa27.03■■□□□ 1.92
SMAD5-207ENST00000511116 PDGFCQ9NRA1 345 aa27.03■■□□□ 1.92
SMAD5-207ENST00000511116 DDX49Q9Y6V7 483 aaKnown RBP27.03■■□□□ 1.92
SMAD5-207ENST00000511116 LOC102724159A0A0B4J2E5 919 aa27.02■■□□□ 1.92
SMAD5-207ENST00000511116 ACRP10323 421 aa27.02■■□□□ 1.92
SMAD5-207ENST00000511116 PBX2P40425 430 aa27.02■■□□□ 1.92
SMAD5-207ENST00000511116 SNAP25P60880 206 aa27.02■■□□□ 1.92
SMAD5-207ENST00000511116 PWP2Q15269 919 aaKnown RBP27.02■■□□□ 1.92
SMAD5-207ENST00000511116 AP5M1Q9H0R1 490 aa27.02■■□□□ 1.92
SMAD5-207ENST00000511116 CCPG1Q9ULG6 757 aa27.02■■□□□ 1.92
SMAD5-207ENST00000511116 GRXCR1A8MXD5 290 aa27.01■■□□□ 1.91
SMAD5-207ENST00000511116 PTGS1P23219 599 aa27.01■■□□□ 1.91
SMAD5-207ENST00000511116 NOL8Q76FK4 1167 aaKnown RBP27.01■■□□□ 1.91
SMAD5-207ENST00000511116 TICAM2Q86XR7 235 aa27.01■■□□□ 1.91
SMAD5-207ENST00000511116 FBXO16Q8IX29 292 aaPredicted RBP27.01■■□□□ 1.91
SMAD5-207ENST00000511116 HIPK3Q9H422 1215 aa27.01■■□□□ 1.91
SMAD5-207ENST00000511116 DYNC1LI2O43237 492 aaPredicted RBP27■■□□□ 1.91
SMAD5-207ENST00000511116 ZEB2O60315 1214 aa27■■□□□ 1.91
SMAD5-207ENST00000511116 RANBP6O60518 1105 aaKnown RBP27■■□□□ 1.91
SMAD5-207ENST00000511116 TMEM63BQ5T3F8 832 aa27■■□□□ 1.91
SMAD5-207ENST00000511116 CHMP4CQ96CF2 233 aa27■■□□□ 1.91
SMAD5-207ENST00000511116 EVI5LQ96CN4 794 aa27■■□□□ 1.91
SMAD5-207ENST00000511116 NOC4LQ9BVI4 516 aaKnown RBP27■■□□□ 1.91
SMAD5-207ENST00000511116 HELLSQ9NRZ9 838 aa27■■□□□ 1.91
SMAD5-207ENST00000511116 TCP11L1Q9NUJ3 509 aa27■■□□□ 1.91
SMAD5-207ENST00000511116 UMODL1Q5DID0 1318 aa26.99■■□□□ 1.91
SMAD5-207ENST00000511116 SYMPKQ92797 1274 aaKnown RBP26.99■■□□□ 1.91
SMAD5-207ENST00000511116 PURBQ96QR8 312 aaKnown RBP26.99■■□□□ 1.91
SMAD5-207ENST00000511116 CXXC1Q9P0U4 656 aaPredicted RBP26.99■■□□□ 1.91
SMAD5-207ENST00000511116 ZMYM6O95789 1325 aa26.98■■□□□ 1.91
SMAD5-207ENST00000511116 B4GALT4O60513 344 aa26.98■■□□□ 1.91
SMAD5-207ENST00000511116 DUSP28Q4G0W2 176 aa26.98■■□□□ 1.91
SMAD5-207ENST00000511116 TTBK2Q6IQ55 1244 aa26.98■■□□□ 1.91
SMAD5-207ENST00000511116 NSMFQ6X4W1 530 aa26.98■■□□□ 1.91
SMAD5-207ENST00000511116 VWCEQ96DN2 955 aa26.98■■□□□ 1.91
SMAD5-207ENST00000511116 WNT8AQ9H1J5 351 aa26.98■■□□□ 1.91
SMAD5-207ENST00000511116 RBM47A0AV96 593 aaKnown RBP26.97■■□□□ 1.91
SMAD5-207ENST00000511116 TOP1P11387 765 aaKnown RBP26.97■■□□□ 1.91
SMAD5-207ENST00000511116 RAB30Q15771 203 aa26.97■■□□□ 1.91
SMAD5-207ENST00000511116 AKNAD1Q5T1N1 836 aa26.97■■□□□ 1.91
SMAD5-207ENST00000511116 SYDE2Q5VT97 1194 aa26.97■■□□□ 1.91
SMAD5-207ENST00000511116 EEPD1Q7L9B9 569 aa26.97■■□□□ 1.91
SMAD5-207ENST00000511116 TRPV6Q9H1D0 765 aa26.97■■□□□ 1.91
SMAD5-207ENST00000511116 ADD3Q9UEY8 706 aaKnown RBP26.97■■□□□ 1.91
SMAD5-207ENST00000511116 FGAP02671 866 aa26.96■■□□□ 1.91
SMAD5-207ENST00000511116 FGBP02675 491 aa26.96■■□□□ 1.91
SMAD5-207ENST00000511116 ALDH5A1P51649 535 aaPredicted RBP26.96■■□□□ 1.91
SMAD5-207ENST00000511116 BAATQ14032 418 aaPredicted RBP26.96■■□□□ 1.91
SMAD5-207ENST00000511116 CCDC96Q2M329 555 aa26.96■■□□□ 1.91
SMAD5-207ENST00000511116 TMEM47Q9BQJ4 181 aa26.96■■□□□ 1.91
SMAD5-207ENST00000511116 MTIF3Q9H2K0 278 aaKnown RBP26.96■■□□□ 1.91
SMAD5-207ENST00000511116 GBF1Q92538 1859 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms