RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 SDF4Q9BRK5 362 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 TSPY26PQ9H489 355 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 CLSTN2Q9H4D0 955 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
DHFR-205ENST00000511032 SPDYE3A6NKU9 549 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 NR1I2O75469 434 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
DHFR-205ENST00000511032 GCFC2P16383 781 aaKnown RBP12.14□□□□□ -0.47
DHFR-205ENST00000511032 MCM7P33993 719 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 BACE1P56817 501 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 ATP2C1P98194 919 aaPredicted RBP12.14□□□□□ -0.47
DHFR-205ENST00000511032 ZNF174Q15697 407 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 INF2Q27J81 1249 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 SASS6Q6UVJ0 657 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 SLF1Q9BQI6 1058 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 RAB34Q9BZG1 259 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 ABCB11O95342 1321 aa12.14□□□□□ -0.47
DHFR-205ENST00000511032 A0A1B0GVL5 298 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 PTPRAP18433 802 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 SPP2Q13103 211 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 PTGDRQ13258 359 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 MTMR2Q13614 643 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
DHFR-205ENST00000511032 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
DHFR-205ENST00000511032 JAKMIP3Q5VZ66 844 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 RESP18Q5W5W9 173 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 KANK3Q6NY19 840 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 DTHD1Q6ZMT9 781 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 ARMC9Q7Z3E5 817 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 RASGRP4Q8TDF6 673 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 TIGD1Q96MW7 591 aa12.13□□□□□ -0.47
DHFR-205ENST00000511032 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
DHFR-205ENST00000511032 TAF1DQ9H5J8 278 aaPredicted RBP12.13□□□□□ -0.47
DHFR-205ENST00000511032 BIN2Q9UBW5 565 aaPredicted RBP12.13□□□□□ -0.47
DHFR-205ENST00000511032 FBXO2Q9UK22 296 aaPredicted RBP12.13□□□□□ -0.47
DHFR-205ENST00000511032 POLR2AP24928 1970 aaKnown RBP12.12□□□□□ -0.47
DHFR-205ENST00000511032 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 NEMFO60524 1076 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
DHFR-205ENST00000511032 ZBED4O75132 1171 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 CAVIN2O95810 425 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 PFKFB1P16118 471 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 LONP1P36776 959 aaKnown RBP12.12□□□□□ -0.47
DHFR-205ENST00000511032 PRPHP41219 470 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 TMEM266Q2M3C6 531 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 LETM2Q2VYF4 491 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 USH1GQ495M9 461 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 EARS2Q5JPH6 523 aaKnown RBP12.12□□□□□ -0.47
DHFR-205ENST00000511032 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
DHFR-205ENST00000511032 PRAMEF18Q5VWM3 479 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 ANKRD13AQ8IZ07 590 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.12□□□□□ -0.471e-9■■□□□ 13.5
DHFR-205ENST00000511032 TBCKQ8TEA7 893 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 ZKSCAN4Q969J2 545 aaPredicted RBP12.12□□□□□ -0.47
DHFR-205ENST00000511032 C12orf42Q96LP6 360 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 ZHX2Q9Y6X8 837 aa12.12□□□□□ -0.47
DHFR-205ENST00000511032 FAM237AA0A1B0GTK4 181 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 ADM5C9JUS6 153 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 MARCH6O60337 910 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 PPP1R11O60927 126 aaPredicted RBP12.11□□□□□ -0.47
DHFR-205ENST00000511032 FLOT1O75955 427 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 ZNF202O95125 648 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
DHFR-205ENST00000511032 VCAM1P19320 739 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 DEKP35659 375 aaKnown RBP12.11□□□□□ -0.47
DHFR-205ENST00000511032 NDUFA8P51970 172 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 MCF2L2Q86YR7 1114 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 FMR1NBQ8N0W7 255 aaPredicted RBP12.11□□□□□ -0.47
DHFR-205ENST00000511032 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 CDCA5Q96FF9 252 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 GRPEL1Q9HAV7 217 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 RABGAP1Q9Y3P9 1069 aa12.11□□□□□ -0.47
DHFR-205ENST00000511032 FSD2A1L4K1 749 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 VWA3AA6NCI4 1184 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 GCOM1H8Y6P7 765 aaPredicted RBP12.1□□□□□ -0.47
DHFR-205ENST00000511032 PIK3CDO00329 1044 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 USP2O75604 605 aaPredicted RBP12.1□□□□□ -0.47
DHFR-205ENST00000511032 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 POLR2MP0CAP2 368 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 CLK2P49760 499 aaKnown RBP12.1□□□□□ -0.47
DHFR-205ENST00000511032 USP11P51784 963 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 CAMK4Q16566 473 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 PPP4R3AQ6IN85 833 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 CCDC174Q6PII3 467 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 CCDC84Q86UT8 332 aaPredicted RBP12.1□□□□□ -0.47
DHFR-205ENST00000511032 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 ENGASEQ8NFI3 743 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 AK8Q96MA6 479 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
DHFR-205ENST00000511032 GOLPH3LQ9H4A5 285 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 RPAP3Q9H6T3 665 aaPredicted RBP12.1□□□□□ -0.47
DHFR-205ENST00000511032 CCPG1Q9ULG6 757 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
DHFR-205ENST00000511032 MYPNQ86TC9 1320 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms