RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	RAD9A	Q99638	391 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	TRMT13	Q9NUP7	481 aa	Known RBP	13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	MTUS1	Q9ULD2	1270 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	PA2G4	Q9UQ80	394 aa	Known RBP	13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	COL11A1	P12107	1806 aa	Predicted RBP	13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	SI	P14410	1827 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	FASN	P49327	2511 aa	Known RBP	13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	GJB5	O95377	273 aa		13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	AVPR2	P30518	371 aa		13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	LTBR	P36941	435 aa		13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	WDR5	P61964	334 aa	Known RBP	13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	ZXDA	P98168	799 aa		13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	TTC6	Q86TZ1	520 aa		13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	VCPKMT	Q9H867	229 aa		13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	TMX2	Q9Y320	296 aa		13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	SPTBN2	O15020	2390 aa		13.14	□□□□□ -0.31
PTCD2-208	ENST00000510676	MYH1	P12882	1939 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	SOWAHB	A6NEL2	793 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	ZEB2	O60315	1214 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	KCNJ6	P48051	423 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	PSMC6	P62333	389 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	TNFAIP2	Q03169	654 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	PTPRO	Q16827	1216 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	CTC1	Q2NKJ3	1217 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	ARMCX2	Q7L311	632 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	TLK2	Q86UE8	772 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	CERS3	Q8IU89	383 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	WDR63	Q8IWG1	891 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	SPICE1	Q8N0Z3	855 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	BANK1	Q8NDB2	785 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	DDX11	Q96FC9	970 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	FBXO28	Q9NVF7	368 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	PPP1R9A	Q9ULJ8	1098 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	MYO7A	Q13402	2215 aa		13.13	□□□□□ -0.31
PTCD2-208	ENST00000510676	MCM3AP	O60318	1980 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	TANC1	Q9C0D5	1861 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676		H0Y858	1186 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	PLCD1	P51178	756 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	TFCP2	Q12800	502 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	ASIC4	Q96FT7	647 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	ZBED2	Q9BTP6	218 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	TEX13B	Q9BXU2	312 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	TLR9	Q9NR96	1032 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676		Q9Y3F1	56 aa		13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.12	□□□□□ -0.31
PTCD2-208	ENST00000510676	FAM208B	Q5VWN6	2430 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	SETX	Q7Z333	2677 aa	Known RBP	13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	MBTPS2	O43462	519 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	NCK2	O43639	380 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	DYNLL1	P63167	89 aa	Known RBP	13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	TCEAL5	Q5H9L2	206 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	TMEM179	Q6ZVK1	233 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	CCDC144CP	Q8IYA2	1237 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	FBXO22	Q8NEZ5	403 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	CNTNAP3B	Q96NU0	1288 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	CNTNAP3	Q9BZ76	1288 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	SH2D4A	Q9H788	454 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	PTPRC	P08575	1304 aa		13.11	□□□□□ -0.31
PTCD2-208	ENST00000510676	ATP2A1	O14983	1001 aa		13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	GALR2	O43603	387 aa	Predicted RBP	13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	UQCRFS1P1	P0C7P4	283 aa		13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	DEFB103A	P81534	67 aa		13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	SIGLEC14	Q08ET2	396 aa		13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	GPNMB	Q14956	572 aa		13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	C17orf80	Q9BSJ5	609 aa		13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	AP5M1	Q9H0R1	490 aa		13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	RIPK3	Q9Y572	518 aa		13.1	□□□□□ -0.31
PTCD2-208	ENST00000510676	SMAD4	Q13485	552 aa	Known RBP	13.09	□□□□□ -0.31
PTCD2-208	ENST00000510676	CBX2	Q14781	532 aa	Predicted RBP	13.09	□□□□□ -0.31
PTCD2-208	ENST00000510676	RETREG2	Q8NC44	543 aa		13.09	□□□□□ -0.31
PTCD2-208	ENST00000510676	NEUROD6	Q96NK8	337 aa		13.09	□□□□□ -0.31
PTCD2-208	ENST00000510676	NSUN3	Q9H649	340 aa	Known RBP	13.09	□□□□□ -0.31
PTCD2-208	ENST00000510676	ARHGEF10L	Q9HCE6	1279 aa		13.09	□□□□□ -0.31
PTCD2-208	ENST00000510676	CLDND1	Q9NY35	253 aa		13.09	□□□□□ -0.31
PTCD2-208	ENST00000510676	LOC730098	B7Z3J9	87 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	STXBP3	O00186	592 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	MPHOSPH10	O00566	681 aa	Known RBP	13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	DYNC1LI2	O43237	492 aa	Predicted RBP	13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	CYP2E1	P05181	493 aa	Predicted RBP	13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	SMPD1	P17405	629 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	USP5	P45974	858 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	BFSP2	Q13515	415 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	NBPF20	Q3BBV1	942 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	GORAB	Q5T7V8	394 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	SNRNP48	Q6IEG0	339 aa	Known RBP	13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	NOL8	Q76FK4	1167 aa	Known RBP	13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	DGLUCY	Q7Z3D6	616 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	RPAIN	Q86UA6	219 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	ADSSL1	Q8N142	457 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	NKD2	Q969F2	451 aa	Predicted RBP	13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	RMDN1	Q96DB5	314 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	SAMD11	Q96NU1	681 aa		13.08	□□□□□ -0.32
PTCD2-208	ENST00000510676	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.07	□□□□□ -0.32
PTCD2-208	ENST00000510676		H3BNC9	293 aa		13.07	□□□□□ -0.32
PTCD2-208	ENST00000510676	CXCL10	P02778	98 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms