RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 GRIA2P42262 883 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 PPP2R2AP63151 447 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 RASGRF1Q13972 1273 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 RASA3Q14644 834 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 SOGA3Q5TF21 947 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 HLA-DQA1Q5Y7H0 255 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 SPATC1Q76KD6 591 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 COPS5Q92905 334 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 CYP26B1Q9NR63 512 aa10.9□□□□□ -0.66
CHD1-205ENST00000508756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHD1-205ENST00000508756 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
CHD1-205ENST00000508756 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 FAM221BA6H8Z2 402 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 THBDP07204 575 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 LAPTM5Q13571 262 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 UBXN4Q92575 508 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 DEPDC7Q96QD5 511 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 SNTG2Q9NY99 539 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 CLEC1BQ9P126 229 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 IMPACTQ9P2X3 320 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 PFDN2Q9UHV9 154 aa10.89□□□□□ -0.67
CHD1-205ENST00000508756 WTIPA6NIX2 430 aaPredicted RBP10.88□□□□□ -0.67
CHD1-205ENST00000508756 TBC1D8O95759 1140 aa10.88□□□□□ -0.67
CHD1-205ENST00000508756 SNRPB2P08579 225 aaKnown RBP10.88□□□□□ -0.67
CHD1-205ENST00000508756 PLS3P13797 630 aa10.88□□□□□ -0.67
CHD1-205ENST00000508756 SNX17Q15036 470 aa10.88□□□□□ -0.67
CHD1-205ENST00000508756 MTERF2Q49AM1 385 aa10.88□□□□□ -0.67
CHD1-205ENST00000508756 GALNT18Q6P9A2 607 aa10.88□□□□□ -0.67
CHD1-205ENST00000508756 JAMLQ86YT9 394 aa10.88□□□□□ -0.67
CHD1-205ENST00000508756 CAPNS1P04632 268 aa10.87□□□□□ -0.67
CHD1-205ENST00000508756 ECI1P42126 302 aa10.87□□□□□ -0.67
CHD1-205ENST00000508756 PRSS53Q2L4Q9 553 aa10.87□□□□□ -0.67
CHD1-205ENST00000508756 MPZL3Q6UWV2 235 aa10.87□□□□□ -0.67
CHD1-205ENST00000508756 CPNE8Q86YQ8 564 aa10.87□□□□□ -0.67
CHD1-205ENST00000508756 NUP43Q8NFH3 380 aa10.87□□□□□ -0.67
CHD1-205ENST00000508756 SGSM3Q96HU1 749 aa10.87□□□□□ -0.67
CHD1-205ENST00000508756 CWC22Q9HCG8 908 aaKnown RBP10.87□□□□□ -0.67
CHD1-205ENST00000508756 YBX2Q9Y2T7 364 aaKnown RBP10.87□□□□□ -0.67
CHD1-205ENST00000508756 IQCA1LA6NCM1 817 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 PRKCAP17252 672 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 PAMP19021 973 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 HOXC12P31275 282 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 KCNJ6P48051 423 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 FRS2Q8WU20 508 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 SRPK1Q96SB4 655 aaKnown RBP10.86□□□□□ -0.67
CHD1-205ENST00000508756 OSBPL2Q9H1P3 480 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 ARHGEF4Q9NR80 690 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 RNF114Q9Y508 228 aa10.86□□□□□ -0.67
CHD1-205ENST00000508756 NPHP3-ACAD11A0A0J9YXS1 232 aa10.85□□□□□ -0.67
CHD1-205ENST00000508756 DIAPH1O60610 1272 aaKnown RBP10.85□□□□□ -0.67
CHD1-205ENST00000508756 MSL3P1P0C860 447 aa10.85□□□□□ -0.67
CHD1-205ENST00000508756 GFRA1P56159 465 aa10.85□□□□□ -0.67
CHD1-205ENST00000508756 MBLAC2Q68D91 279 aa10.85□□□□□ -0.67
CHD1-205ENST00000508756 NPLOC4Q8TAT6 608 aa10.85□□□□□ -0.67
CHD1-205ENST00000508756 INTS4Q96HW7 963 aaKnown RBP10.85□□□□□ -0.67
CHD1-205ENST00000508756 L1CAMP32004 1257 aa10.84□□□□□ -0.67
CHD1-205ENST00000508756 HSP90AA2PQ14568 343 aaPredicted RBP10.84□□□□□ -0.67
CHD1-205ENST00000508756 PRR23BQ6ZRT6 265 aa10.84□□□□□ -0.67
CHD1-205ENST00000508756 LRRC47Q8N1G4 583 aaKnown RBP10.84□□□□□ -0.67
CHD1-205ENST00000508756 TMEM145Q8NBT3 493 aa10.84□□□□□ -0.67
CHD1-205ENST00000508756 ZNF669Q96BR6 464 aaPredicted RBP10.84□□□□□ -0.67
CHD1-205ENST00000508756 AARSD1Q9BTE6 412 aaKnown RBP10.84□□□□□ -0.67
CHD1-205ENST00000508756 IER2Q9BTL4 223 aa10.84□□□□□ -0.67
CHD1-205ENST00000508756 SPATA9Q9BWV2 254 aa10.84□□□□□ -0.67
CHD1-205ENST00000508756 ACSL6Q9UKU0 697 aa10.84□□□□□ -0.67
CHD1-205ENST00000508756 LRRC10BA6NIK2 292 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 PAX4O43316 350 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 SCG5P05408 212 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 SDHBP21912 280 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 MVKQ03426 396 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 SSRP1Q08945 709 aaKnown RBP10.83□□□□□ -0.68
CHD1-205ENST00000508756 MLANAQ16655 118 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 YOD1Q5VVQ6 348 aaPredicted RBP10.83□□□□□ -0.68
CHD1-205ENST00000508756 KREMEN2Q8NCW0 462 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 DIRC2Q96SL1 478 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 KRTAP4-8Q9BYQ9 185 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 LNPKQ9C0E8 428 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 SLC6A17Q9H1V8 727 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 CRTAC1Q9NQ79 661 aa10.83□□□□□ -0.68
CHD1-205ENST00000508756 TMEFF2Q9UIK5 374 aaPredicted RBP10.83□□□□□ -0.68
CHD1-205ENST00000508756 A0A1W2PQ27 194 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 A0A1W2PQ64 194 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 A0A1W2PQC6 194 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 A0A1W2PQD8 194 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 PNLIPP16233 465 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 IFRD2Q12894 506 aaPredicted RBP10.82□□□□□ -0.68
CHD1-205ENST00000508756 BMS1Q14692 1282 aaKnown RBP10.82□□□□□ -0.68
CHD1-205ENST00000508756 DENND5AQ6IQ26 1287 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 LRP10Q7Z4F1 713 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 MKL1Q969V6 931 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 C1orf159Q96HA4 380 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 CCDC140Q96MF4 163 aa10.82□□□□□ -0.68
CHD1-205ENST00000508756 TRBV23OR9-2A0A075B6M9 112 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 ARNTLO00327 626 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 ADCY3O60266 1144 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 TACR1P25103 407 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 PDE6BP35913 854 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 CYP4F8P98187 520 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 INF2Q27J81 1249 aa10.81□□□□□ -0.68
CHD1-205ENST00000508756 ADGRF1Q5T601 910 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms