RNA–Protein interactions for RNA: ENST00000508616.1

AC117473.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC117473.1, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC117473.1-201ENST00000508616 CAPNS2Q96L46 248 aa8.47□□□□□ -1.05
AC117473.1-201ENST00000508616 UPF3BQ9BZI7 483 aaKnown RBP8.47□□□□□ -1.05
AC117473.1-201ENST00000508616 KAT14Q9H8E8 782 aa8.47□□□□□ -1.05
AC117473.1-201ENST00000508616 IL21Q9HBE4 155 aa8.47□□□□□ -1.05
AC117473.1-201ENST00000508616 PDRG1Q9NUG6 133 aa8.47□□□□□ -1.05
AC117473.1-201ENST00000508616 COL11A1P12107 1806 aaPredicted RBP8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 TRIM75PA6NK02 468 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 NDUFB10O96000 172 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 CALM1P0DP23 149 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 CALM2P0DP24 149 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 CALM3P0DP25 149 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 PDHBP11177 359 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 CPA1P15085 419 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 SMARCA1P28370 1054 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 NEK4P51957 841 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 HMGCS2P54868 508 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 SREBF2Q12772 1141 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 IRF5Q13568 498 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 TJAP1Q5JTD0 557 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 KIAA1755Q5JYT7 1200 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 GPATCH4Q5T3I0 446 aaKnown RBP8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 CYP4F22Q6NT55 531 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 GPAT2Q6NUI2 795 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 BTNL9Q6UXG8 535 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 LBX2Q6XYB7 198 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 ANKRD23Q86SG2 305 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 ZNF654Q8IZM8 581 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 DCAF4Q8WV16 495 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 CFHR5Q9BXR6 569 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 SENP2Q9HC62 589 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 PRDM9Q9NQV7 894 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 TMOD4Q9NZQ9 345 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 AGTPBP1Q9UPW5 1226 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 USTQ9Y2C2 406 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 MYPNQ86TC9 1320 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 WDR33Q9C0J8 1336 aaKnown RBP8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 MYH6P13533 1939 aa8.46□□□□□ -1.06
AC117473.1-201ENST00000508616 CCL15-CCL14A0A0B4J2E2 113 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 PALM3A6NDB9 673 aaPredicted RBP8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 CCDC69A6NI79 296 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 VCAM1P19320 739 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 MCM2P49736 904 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 VEGFBP49765 207 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 AK2P54819 239 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 ATP2B2Q01814 1243 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 ZNF543Q08ER8 600 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 PABPC4Q13310 644 aaKnown RBP eCLIP8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 GRM4Q14833 912 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 CCL15Q16663 113 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 ASPRV1Q53RT3 343 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 SLFN13Q68D06 897 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 APOA5Q6Q788 366 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 CATSPERGQ6ZRH7 1159 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 CATIPQ7Z7H3 387 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 LRRC47Q8N1G4 583 aaKnown RBP8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 DNAJC5GQ8N7S2 189 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 BRI3BPQ8WY22 251 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 BRF1Q92994 677 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 TCEANC2Q96MN5 208 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 FEZ1Q99689 392 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 PTPN18Q99952 460 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 LRRC2Q9BYS8 371 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 GZF1Q9H116 711 aaPredicted RBP8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 ADAMTS5Q9UNA0 930 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 SLC12A7Q9Y666 1083 aa8.45□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L15C9J2P7 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L13C9JLJ4 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L11C9JVI0 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L18D6R9N7 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L22D6RA61 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L17D6RBQ6 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L19D6RCP7 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L20D6RJB6 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 ADH1BP00325 375 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 ALDH1A1P00352 501 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 BMP3P12645 472 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 PDIA3P30101 505 aaKnown RBP8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 CTHP32929 405 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 SLC1A4P43007 532 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 KIF23Q02241 960 aaPredicted RBP8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 APOBRQ0VD83 1088 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 MSS51Q4VC12 460 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 TREML2Q5T2D2 321 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 OTUD7BQ6GQQ9 843 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 FANCBQ8NB91 859 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 MAD2L2Q9UI95 211 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 FEM1BQ9UK73 627 aa8.44□□□□□ -1.06
AC117473.1-201ENST00000508616 KLF18A0A0U1RQI7 1052 aa8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 CCDC196A0A1B0GTZ2 297 aa8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 BTBD19C9JJ37 291 aa8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 IGF2BP3O00425 579 aaKnown RBP eCLIP8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 ZBTB43O43298 467 aa8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 PFKFB2O60825 505 aa8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 PARP1P09874 1014 aaKnown RBP8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 KIF5BP33176 963 aa8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 GNAQP50148 359 aa8.43□□□□□ -1.06
AC117473.1-201ENST00000508616 STAT2P52630 851 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms