RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 LAMA4Q16363 1823 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 TOP1P11387 765 aaKnown RBP15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 RAG1P15918 1043 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 SLC16A2P36021 539 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 CDK7P50613 346 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 NKX3-2P78367 333 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 GNASQ5JWF2 1037 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 PLEKHM2Q8IWE5 1019 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 GLT1D1Q96MS3 346 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 GUCD1Q96NT3 240 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 RWDD1Q9H446 243 aaPredicted RBP15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 SPC25Q9HBM1 224 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 TMEM39AQ9NV64 488 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 CCPG1Q9ULG6 757 aa15.25■□□□□ 0.03
SH3TC1-215ENST00000508438 FRMPD2Q68DX3 1309 aaPredicted RBP15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 ASB14A6NK59 587 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 DCDC2CA8MYV0 355 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 ICAM1P05362 532 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 SDSP20132 328 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 TNFAIP2Q03169 654 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 AKNAD1Q5T1N1 836 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 SYDE2Q5VT97 1194 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 TBC1D10CQ8IV04 446 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 PURBQ96QR8 312 aaKnown RBP15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 OSBPL3Q9H4L5 887 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 TBX21Q9UL17 535 aa15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 GNEQ9Y223 722 aaKnown RBP15.24■□□□□ 0.03
SH3TC1-215ENST00000508438 PDHBP11177 359 aa15.23■□□□□ 0.03
SH3TC1-215ENST00000508438 PTGS1P23219 599 aa15.23■□□□□ 0.03
SH3TC1-215ENST00000508438 BEX3Q00994 111 aa15.23■□□□□ 0.03
SH3TC1-215ENST00000508438 NUCB1Q02818 461 aa15.23■□□□□ 0.03
SH3TC1-215ENST00000508438 NSMFQ6X4W1 530 aa15.23■□□□□ 0.03
SH3TC1-215ENST00000508438 EXOC6Q8TAG9 804 aa15.23■□□□□ 0.03
SH3TC1-215ENST00000508438 GPCPD1Q9NPB8 672 aa15.23■□□□□ 0.03
SH3TC1-215ENST00000508438 PDGFCQ9NRA1 345 aa15.23■□□□□ 0.03
SH3TC1-215ENST00000508438 NEDD4P46934 1319 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 MROH7Q68CQ1 1323 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 A0A0U1RQG5 324 aaPredicted RBP15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 ARVCFO00192 962 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 PCP11498 1178 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 SMPD1P17405 629 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 FPGSQ05932 587 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 TMEM63BQ5T3F8 832 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 ZNF697Q5TEC3 545 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 TAPT1Q6NXT6 567 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 MFSD6Q6ZSS7 791 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 EEPD1Q7L9B9 569 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 FBXO16Q8IX29 292 aaPredicted RBP15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 MORC4Q8TE76 937 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 VTI1AQ96AJ9 217 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 TTC14Q96N46 770 aa15.22■□□□□ 0.03
SH3TC1-215ENST00000508438 NFIBO00712 420 aa15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 TIMP1P01033 207 aa15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 SNHG28P0DPA3 235 aa15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 MFAP1P55081 439 aaKnown RBP15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 ZNF543Q08ER8 600 aa15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 BAATQ14032 418 aaPredicted RBP15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 NOL8Q76FK4 1167 aaKnown RBP15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 FAM126BQ8IXS8 530 aa15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 RNPC3Q96LT9 517 aaKnown RBP15.21■□□□□ 0.03
SH3TC1-215ENST00000508438 ALDH5A1P51649 535 aaPredicted RBP15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 FSCN1Q16658 493 aaKnown RBP15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 IQSEC1Q6DN90 963 aa15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 MFSD5Q6N075 450 aa15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 CWC27Q6UX04 472 aaKnown RBP15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 CXCL17Q6UXB2 119 aa15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 SLC43A3Q8NBI5 491 aa15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 CLEC4DQ8WXI8 215 aa15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 ZKSCAN3Q9BRR0 538 aa15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 TTYH1Q9H313 450 aaPredicted RBP15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 RNF41Q9H4P4 317 aaPredicted RBP15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 VTA1Q9NP79 307 aa15.2■□□□□ 0.02
SH3TC1-215ENST00000508438 DLL1O00548 723 aa15.19■□□□□ 0.02
SH3TC1-215ENST00000508438 ZNF213O14771 459 aa15.19■□□□□ 0.02
SH3TC1-215ENST00000508438 DYNC1LI2O43237 492 aaPredicted RBP15.19■□□□□ 0.02
SH3TC1-215ENST00000508438 CD4P01730 458 aa15.19■□□□□ 0.02
SH3TC1-215ENST00000508438 ESR2Q92731 530 aa15.19■□□□□ 0.02
SH3TC1-215ENST00000508438 CDX2Q99626 313 aaPredicted RBP15.19■□□□□ 0.02
SH3TC1-215ENST00000508438 AP5M1Q9H0R1 490 aa15.19■□□□□ 0.02
SH3TC1-215ENST00000508438 Q9Y3F1 56 aa15.19■□□□□ 0.02
SH3TC1-215ENST00000508438 GRIN2DO15399 1336 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 MYH6P13533 1939 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 PTPDC1A2A3K4 754 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 CABYRO75952 493 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 SLC30A10Q6XR72 485 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 KIAA1211Q6ZU35 1233 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 C16orf59Q7L2K0 433 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 DGKHQ86XP1 1220 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 PPP1R12CQ9BZL4 782 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 DIAPH3Q9NSV4 1193 aa15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 ADD3Q9UEY8 706 aaKnown RBP15.18■□□□□ 0.02
SH3TC1-215ENST00000508438 WDR19Q8NEZ3 1342 aa15.17■□□□□ 0.02
SH3TC1-215ENST00000508438 A0A0C4DFX4 3053 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms