RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 FGF10O15520 208 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 NT5DC1Q5TFE4 455 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 INTS3Q68E01 1043 aaKnown RBP7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 CYP2R1Q6VVX0 501 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 JAMLQ86YT9 394 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 SLITRK4Q8IW52 837 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 DHRS1Q96LJ7 313 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 RNF38Q9H0F5 515 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 PDLIM7Q9NR12 457 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 PMF1-BGLAPU3KQ54 211 aa7.82□□□□□ -1.16
TRAPPC13-209ENST00000508304 H0Y8X5 98 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 ACRP10323 421 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 INSRRP14616 1297 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 DLX2Q07687 328 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 UBXN11Q5T124 520 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 CWF19L1Q69YN2 538 aaKnown RBP7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 KRTAP5-3Q6L8H2 238 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 SPATA25Q9BR10 227 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 USP40Q9NVE5 1235 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 GGT7Q9UJ14 662 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 MYRFQ9Y2G1 1151 aa7.81□□□□□ -1.16
TRAPPC13-209ENST00000508304 K7ESM1 405 aa7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 CORO7P57737 925 aa7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 PRR5P85299 388 aa7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 ANKRD39Q53RE8 183 aa7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 BICRALQ6AI39 1079 aa7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 CCDC144CPQ8IYA2 1237 aa7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 ZNF526Q8TF50 670 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 NKD1Q969G9 470 aa7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 NT5C1AQ9BXI3 368 aa7.8□□□□□ -1.16
TRAPPC13-209ENST00000508304 PMS1P54277 932 aaKnown RBP7.79□□□□□ -1.16
TRAPPC13-209ENST00000508304 HS2ST1Q7LGA3 356 aa7.79□□□□□ -1.16
TRAPPC13-209ENST00000508304 FERMT3Q86UX7 667 aa7.79□□□□□ -1.16
TRAPPC13-209ENST00000508304 A0A1W2PQJ5 194 aa7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 F8W031 263 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 NCAM1P13591 858 aa7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 ZNF445P59923 1031 aa7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 PUM1Q14671 1186 aaKnown RBP eCLIP7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 PPFIBP1Q86W92 1011 aa7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 NLGN2Q8NFZ4 835 aa7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 SMARCC1Q92922 1105 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 GPR20Q99678 358 aa7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 FAN1Q9Y2M0 1017 aa7.78□□□□□ -1.16
TRAPPC13-209ENST00000508304 FAM86C2PA6NEL3 165 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 ASGR2P07307 311 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 MC3RP41968 323 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 ZNF827Q17R98 1081 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 TDRD10Q5VZ19 366 aaKnown RBP7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 DCAF15Q66K64 600 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 PTCHD1Q96NR3 888 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 FCRL3Q96P31 734 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 GP6Q9HCN6 339 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 FHOD1Q9Y613 1164 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 DUSP10Q9Y6W6 482 aa7.77□□□□□ -1.17
TRAPPC13-209ENST00000508304 NOBOXO60393 691 aa7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 ERCC3P19447 782 aa7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 TACR1P25103 407 aa7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 NOP2P46087 812 aaKnown RBP7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 AXDND1Q5T1B0 1012 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 B3GNT8Q7Z7M8 397 aa7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 TAB3Q8N5C8 712 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 PALD1Q9ULE6 856 aa7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 ZNRF3Q9ULT6 936 aa7.76□□□□□ -1.17
TRAPPC13-209ENST00000508304 GLI4P10075 376 aa7.75□□□□□ -1.17
TRAPPC13-209ENST00000508304 MAGEA10P43363 369 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC13-209ENST00000508304 NOL9Q5SY16 702 aaKnown RBP7.75□□□□□ -1.17
TRAPPC13-209ENST00000508304 CARFQ8N187 725 aa7.75□□□□□ -1.17
TRAPPC13-209ENST00000508304 BRF1Q92994 677 aa7.75□□□□□ -1.17
TRAPPC13-209ENST00000508304 TBC1D8O95759 1140 aa7.74□□□□□ -1.17
TRAPPC13-209ENST00000508304 IFNGR1P15260 489 aa7.74□□□□□ -1.17
TRAPPC13-209ENST00000508304 L1CAMP32004 1257 aa7.74□□□□□ -1.17
TRAPPC13-209ENST00000508304 CNR2P34972 360 aa7.74□□□□□ -1.17
TRAPPC13-209ENST00000508304 MRPL58Q14197 206 aaKnown RBP7.74□□□□□ -1.17
TRAPPC13-209ENST00000508304 FIBCD1Q8N539 461 aa7.74□□□□□ -1.17
TRAPPC13-209ENST00000508304 LNPKQ9C0E8 428 aa7.74□□□□□ -1.17
TRAPPC13-209ENST00000508304 DBR1Q9UK59 544 aaKnown RBP7.74□□□□□ -1.17
TRAPPC13-209ENST00000508304 CD247P20963 164 aa7.73□□□□□ -1.17
TRAPPC13-209ENST00000508304 ALG3Q92685 438 aa7.73□□□□□ -1.17
TRAPPC13-209ENST00000508304 TSPAN17Q96FV3 270 aa7.73□□□□□ -1.17
TRAPPC13-209ENST00000508304 SF3B6Q9Y3B4 125 aaKnown RBP7.73□□□□□ -1.17
TRAPPC13-209ENST00000508304 ITGB3P05106 788 aa7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 IMPDH2P12268 514 aa7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 PMLP29590 882 aa7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 ADAM17P78536 824 aa7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 KIAA0825Q8IV33 1275 aa7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 DDX1Q92499 740 aaKnown RBP7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 RBM15Q96T37 977 aaKnown RBP eCLIP7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 TM9SF2Q99805 663 aa7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 ZNF451Q9Y4E5 1061 aa7.72□□□□□ -1.17
TRAPPC13-209ENST00000508304 CD3EP07766 207 aa7.71□□□□□ -1.18
TRAPPC13-209ENST00000508304 TNFRSF1AP19438 455 aa7.71□□□□□ -1.18
TRAPPC13-209ENST00000508304 GJA9P57773 515 aa7.71□□□□□ -1.18
TRAPPC13-209ENST00000508304 POU4F1Q01851 419 aa7.71□□□□□ -1.18
TRAPPC13-209ENST00000508304 RGS22Q8NE09 1264 aa7.71□□□□□ -1.18
TRAPPC13-209ENST00000508304 SPON2Q9BUD6 331 aa7.71□□□□□ -1.18
TRAPPC13-209ENST00000508304 TP53P04637 393 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 ZYXQ15942 572 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 RCSD1Q6JBY9 416 aa7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 USP48Q86UV5 1035 aa7.7□□□□□ -1.18
TRAPPC13-209ENST00000508304 CPA5Q8WXQ8 436 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms