RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 TMEM260Q9NX78 707 aa18.5■□□□□ 0.55
SPSB4-203ENST00000508126 NDUFA8P51970 172 aa18.5■□□□□ 0.55
SPSB4-203ENST00000508126 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
SPSB4-203ENST00000508126 UBE2SQ16763 222 aa18.5■□□□□ 0.55
SPSB4-203ENST00000508126 SHC4Q6S5L8 630 aa18.5■□□□□ 0.55
SPSB4-203ENST00000508126 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
SPSB4-203ENST00000508126 LRSAM1Q6UWE0 723 aa18.5■□□□□ 0.55
SPSB4-203ENST00000508126 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.5■□□□□ 0.55
SPSB4-203ENST00000508126 SNCAIPQ9Y6H5 919 aa18.5■□□□□ 0.55
SPSB4-203ENST00000508126 FLOT1O75955 427 aa18.49■□□□□ 0.55
SPSB4-203ENST00000508126 PFKFB1P16118 471 aa18.49■□□□□ 0.55
SPSB4-203ENST00000508126 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
SPSB4-203ENST00000508126 MAP3K11Q16584 847 aa18.49■□□□□ 0.55
SPSB4-203ENST00000508126 ARL6IP4Q66PJ3 421 aaKnown RBP18.49■□□□□ 0.55
SPSB4-203ENST00000508126 CCDC174Q6PII3 467 aa18.49■□□□□ 0.55
SPSB4-203ENST00000508126 FMR1NBQ8N0W7 255 aaPredicted RBP18.49■□□□□ 0.55
SPSB4-203ENST00000508126 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
SPSB4-203ENST00000508126 RPAP3Q9H6T3 665 aaPredicted RBP18.49■□□□□ 0.55
SPSB4-203ENST00000508126 FAM13BQ9NYF5 915 aa18.49■□□□□ 0.55
SPSB4-203ENST00000508126 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
SPSB4-203ENST00000508126 LAD1O00515 517 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 CTAGE5O15320 804 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 HMGCS2P54868 508 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 AP3B2Q13367 1082 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 DGKZQ13574 1117 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 TTLL12Q14166 644 aaPredicted RBP18.48■□□□□ 0.55
SPSB4-203ENST00000508126 LETM2Q2VYF4 491 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 CLEC11AQ9Y240 323 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 AFG3L2Q9Y4W6 797 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 PAPPA2Q9BXP8 1791 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 PHIPQ8WWQ0 1821 aa18.48■□□□□ 0.55
SPSB4-203ENST00000508126 FAM237AA0A1B0GTK4 181 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 CCNT1O60563 726 aaKnown RBP18.47■□□□□ 0.55
SPSB4-203ENST00000508126 CAMK4Q16566 473 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 ANKRD13AQ8IZ07 590 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 MRPL11Q9Y3B7 192 aaKnown RBP18.47■□□□□ 0.55
SPSB4-203ENST00000508126 MRVI1Q9Y6F6 885 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 SYKP43405 635 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 USP17L6PQ6QN14 398 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 PNMA2Q9UL42 364 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 PPP1R9AQ9ULJ8 1098 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 HPSEQ9Y251 543 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 OTOFQ9HC10 1997 aa18.47■□□□□ 0.55
SPSB4-203ENST00000508126 ABCB11O95342 1321 aa18.46■□□□□ 0.55
SPSB4-203ENST00000508126 NEMFO60524 1076 aa18.46■□□□□ 0.55
SPSB4-203ENST00000508126 ICAM1P05362 532 aa18.46■□□□□ 0.55
SPSB4-203ENST00000508126 FDX1P10109 184 aa18.46■□□□□ 0.55
SPSB4-203ENST00000508126 ARMC9Q7Z3E5 817 aa18.46■□□□□ 0.55
SPSB4-203ENST00000508126 CSRNP2Q9H175 543 aa18.46■□□□□ 0.55
SPSB4-203ENST00000508126 CTDP1Q9Y5B0 961 aaPredicted RBP18.46■□□□□ 0.55
SPSB4-203ENST00000508126 VWA3AA6NCI4 1184 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 DCAF8L1A6NGE4 600 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 SPDYE3A6NKU9 549 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 MEIS2O14770 477 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 ZNF202O95125 648 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 FOSP01100 380 aaPredicted RBP18.45■□□□□ 0.54
SPSB4-203ENST00000508126 GRIN1Q05586 938 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 SH3D19Q5HYK7 790 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 LDHDQ86WU2 507 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 GAS2L3Q86XJ1 694 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 NAP1L4Q99733 375 aaKnown RBP18.45■□□□□ 0.54
SPSB4-203ENST00000508126 ANO3Q9BYT9 981 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 KCNH3Q9ULD8 1083 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 CCPG1Q9ULG6 757 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 PIK3CDO00329 1044 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 ZBED4O75132 1171 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 TAL1P17542 331 aaPredicted RBP18.45■□□□□ 0.54
SPSB4-203ENST00000508126 RBM43Q6ZSC3 357 aaKnown RBP18.45■□□□□ 0.54
SPSB4-203ENST00000508126 ERO1BQ86YB8 467 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 C4orf32Q8N8J7 132 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 SDF4Q9BRK5 362 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 TSPY26PQ9H489 355 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 SLC38A10Q9HBR0 1119 aa18.45■□□□□ 0.54
SPSB4-203ENST00000508126 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.45■□□□□ 0.54
SPSB4-203ENST00000508126 OR52Z1P0C646 297 aa18.44■□□□□ 0.54
SPSB4-203ENST00000508126 GCFC2P16383 781 aaKnown RBP18.44■□□□□ 0.54
SPSB4-203ENST00000508126 PRPHP41219 470 aa18.44■□□□□ 0.54
SPSB4-203ENST00000508126 PPATQ06203 517 aa18.44■□□□□ 0.54
SPSB4-203ENST00000508126 SPECC1Q5M775 1068 aa18.44■□□□□ 0.54
SPSB4-203ENST00000508126 L1TD1Q5T7N2 865 aaKnown RBP18.44■□□□□ 0.54
SPSB4-203ENST00000508126 TIGD1Q96MW7 591 aa18.44■□□□□ 0.54
SPSB4-203ENST00000508126 ELP3Q9H9T3 547 aa18.44■□□□□ 0.54
SPSB4-203ENST00000508126 OPLAHO14841 1288 aa18.43■□□□□ 0.54
SPSB4-203ENST00000508126 LONP1P36776 959 aaKnown RBP18.43■□□□□ 0.54
SPSB4-203ENST00000508126 PPP4R3AQ6IN85 833 aa18.43■□□□□ 0.54
SPSB4-203ENST00000508126 DTHD1Q6ZMT9 781 aa18.43■□□□□ 0.54
SPSB4-203ENST00000508126 CKAP2LQ8IYA6 745 aa18.43■□□□□ 0.54
SPSB4-203ENST00000508126 TMEM60Q9H2L4 133 aa18.43■□□□□ 0.54
SPSB4-203ENST00000508126 ZNF536O15090 1300 aa18.43■□□□□ 0.54
SPSB4-203ENST00000508126 GCOM1H8Y6P7 765 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms