RNA–Protein interactions for RNA: ENST00000507968.1

SSBP2-209, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-209ENST00000507968 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
SSBP2-209ENST00000507968 NOL7Q9UMY1 257 aaKnown RBP12.34□□□□□ -0.43
SSBP2-209ENST00000507968 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
SSBP2-209ENST00000507968 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
SSBP2-209ENST00000507968 ZNF536O15090 1300 aa12.34□□□□□ -0.43
SSBP2-209ENST00000507968 PAPPA2Q9BXP8 1791 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 CCDC194A0A1B0GVG4 234 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.44
SSBP2-209ENST00000507968 KIF28PB7ZC32 967 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 STAT3P40763 770 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
SSBP2-209ENST00000507968 NR5A1Q13285 461 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 USH1GQ495M9 461 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 CPXCR1Q8N123 301 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 REXO1Q8N1G1 1221 aaKnown RBP12.33□□□□□ -0.44
SSBP2-209ENST00000507968 REPS2Q8NFH8 660 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 AGBL1Q96MI9 1066 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 RAVER2Q9HCJ3 691 aaKnown RBP12.33□□□□□ -0.44
SSBP2-209ENST00000507968 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
SSBP2-209ENST00000507968 RTEL1Q9NZ71 1219 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 RCOR1Q9UKL0 485 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
SSBP2-209ENST00000507968 GCOM1H8Y6P7 765 aaPredicted RBP12.32□□□□□ -0.44
SSBP2-209ENST00000507968 POLR2MP0CAP2 368 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 MCM4P33991 863 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 COPB2P35606 906 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 CLK2P49760 499 aaKnown RBP12.32□□□□□ -0.44
SSBP2-209ENST00000507968 HERVK_113P62684 666 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 AP3B2Q13367 1082 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 TMEM132BQ14DG7 1078 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 NONOQ15233 471 aaKnown RBP eCLIP12.32□□□□□ -0.44
SSBP2-209ENST00000507968 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
SSBP2-209ENST00000507968 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
SSBP2-209ENST00000507968 RASAL3Q86YV0 1011 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 BRI3BPQ8WY22 251 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
SSBP2-209ENST00000507968 BIN2Q9UBW5 565 aaPredicted RBP12.32□□□□□ -0.44
SSBP2-209ENST00000507968 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
SSBP2-209ENST00000507968 CEP131Q9UPN4 1083 aa12.32□□□□□ -0.44
SSBP2-209ENST00000507968 MYH8P13535 1937 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 DDX11L8A8MPP1 907 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 BTBD19C9JJ37 291 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 PDHXO00330 501 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 MEIS2O14770 477 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 SLC25A27O95847 323 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 BMP15O95972 392 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 SLC10A3P09131 477 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 ALAS1P13196 640 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 NCLP19338 710 aaKnown RBP12.31□□□□□ -0.44
SSBP2-209ENST00000507968 GCLCP48506 637 aaPredicted RBP12.31□□□□□ -0.44
SSBP2-209ENST00000507968 GHRHRQ02643 423 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 FAM173BQ6P4H8 233 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 PIK3AP1Q6ZUJ8 805 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
SSBP2-209ENST00000507968 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 TRERF1Q96PN7 1200 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 NAP1L4Q99733 375 aaKnown RBP12.31□□□□□ -0.44
SSBP2-209ENST00000507968 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
SSBP2-209ENST00000507968 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
SSBP2-209ENST00000507968 DOCK1Q14185 1865 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 YEATS4O95619 227 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-209ENST00000507968 APLP1P51693 650 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 USP11P51784 963 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 SREBF2Q12772 1141 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
SSBP2-209ENST00000507968 ORC2Q13416 577 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-209ENST00000507968 NFKBIBQ15653 356 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 JAKMIP3Q5VZ66 844 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 ANO1Q5XXA6 986 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 SNRNP48Q6IEG0 339 aaKnown RBP12.3□□□□□ -0.44
SSBP2-209ENST00000507968 USP17L6PQ6QN14 398 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 TMEM87AQ8NBN3 555 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 KCNG4Q8TDN1 519 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 CLEC4DQ8WXI8 215 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 SPATA32Q96LK8 384 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 EHMT1Q9H9B1 1298 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.3□□□□□ -0.44
SSBP2-209ENST00000507968 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 RBPJLQ9UBG7 517 aa12.3□□□□□ -0.44
SSBP2-209ENST00000507968 MORC2Q9Y6X9 1032 aaPredicted RBP12.3□□□□□ -0.44
SSBP2-209ENST00000507968 SPDYE3A6NKU9 549 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 OPLAHO14841 1288 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 CFBP00751 764 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 TM4SF4P48230 202 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 TOB1P50616 345 aaPredicted RBP12.29□□□□□ -0.44
SSBP2-209ENST00000507968 HSD17B4P51659 736 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 SLC39A14Q15043 492 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
SSBP2-209ENST00000507968 DEFB115Q30KQ5 88 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 LINC00301Q8NCQ3 95 aa12.29□□□□□ -0.44
SSBP2-209ENST00000507968 LEO1Q8WVC0 666 aaPredicted RBP12.29□□□□□ -0.44
SSBP2-209ENST00000507968 PARK7Q99497 189 aaKnown RBP12.29□□□□□ -0.44
SSBP2-209ENST00000507968 PTPN18Q99952 460 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms