RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 CDCA2Q69YH5 1023 aaPredicted RBP5.54□□□□□ -1.52
USP53-204ENST00000507906 STYK1Q6J9G0 422 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 BEND4Q6ZU67 534 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 MAGEB10Q96LZ2 347 aaPredicted RBP5.54□□□□□ -1.52
USP53-204ENST00000507906 DSCC1Q9BVC3 393 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 HDAC8Q9BY41 377 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 ASPSCR1Q9BZE9 553 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 DUSP15Q9H1R2 295 aaPredicted RBP5.54□□□□□ -1.52
USP53-204ENST00000507906 KCNF1Q9H3M0 494 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 SEMA6BQ9H3T3 888 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 PRR13Q9NZ81 148 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 CAPN6Q9Y6Q1 641 aa5.54□□□□□ -1.52
USP53-204ENST00000507906 HMX2A2RU54 273 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 EFCAB14O75071 495 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 CD3EP07766 207 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 SRFP11831 508 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 ITIH2P19823 946 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 MTMR1Q13613 665 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 CFAP100Q494V2 611 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 CRACR2BQ8N4Y2 399 aaPredicted RBP5.53□□□□□ -1.52
USP53-204ENST00000507906 SLC12A9Q9BXP2 914 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 PRDM5Q9NQX1 630 aaPredicted RBP5.53□□□□□ -1.52
USP53-204ENST00000507906 MCM8Q9UJA3 840 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 SF3B6Q9Y3B4 125 aaKnown RBP5.53□□□□□ -1.52
USP53-204ENST00000507906 NPFFR2Q9Y5X5 522 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 ST14Q9Y5Y6 855 aa5.53□□□□□ -1.52
USP53-204ENST00000507906 C2orf71A6NGG8 1288 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 FAM170BA6NMN3 283 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 ZNF891A8MT65 544 aaPredicted RBP5.52□□□□□ -1.53
USP53-204ENST00000507906 GPR39O43194 453 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 ALDH1L1O75891 902 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 APBA3O96018 575 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 PLS3P13797 630 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 PMLP29590 882 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 IGFALSP35858 605 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 DHCR24Q15392 516 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 UVSSAQ2YD98 709 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 RTP2Q5QGT7 225 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 PIK3R6Q5UE93 754 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 MBLAC2Q68D91 279 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 ZCCHC8Q6NZY4 707 aaKnown RBP5.52□□□□□ -1.53
USP53-204ENST00000507906 OGFOD3Q6PK18 319 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 PAOXQ6QHF9 649 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 MAMDC2Q7Z304 686 aaPredicted RBP5.52□□□□□ -1.53
USP53-204ENST00000507906 NXPE1Q8N323 547 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 PPM1KQ8N3J5 372 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 USHBP1Q8N6Y0 703 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 COG1Q8WTW3 980 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 DCAF4Q8WV16 495 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 TCTN2Q96GX1 697 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 FAM83CQ9BQN1 747 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 PHF20Q9BVI0 1012 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 YIPF2Q9BWQ6 316 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 CLEC1BQ9P126 229 aa5.52□□□□□ -1.53
USP53-204ENST00000507906 ALG1L2C9J202 215 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 M0R2C6 588 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 PIK3R2O00459 728 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 TRAF5O00463 557 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 GLRX3O76003 335 aaKnown RBP5.51□□□□□ -1.53
USP53-204ENST00000507906 MAP4K4O95819 1239 aaPredicted RBP5.51□□□□□ -1.53
USP53-204ENST00000507906 CPP00450 1065 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 CKMP06732 381 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 ZNF865P0CJ78 1059 aaPredicted RBP5.51□□□□□ -1.53
USP53-204ENST00000507906 VAV1P15498 845 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 BPIP17213 487 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 CYP7A1P22680 504 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 GUCY1A3Q02108 690 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 TTF1Q15361 905 aaPredicted RBP5.51□□□□□ -1.53
USP53-204ENST00000507906 INF2Q27J81 1249 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 TXNRD3Q86VQ6 643 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 PPIL6Q8IXY8 311 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 PCDH19Q8TAB3 1148 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 WDR66Q8TBY9 1149 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 CRTAC1Q9NQ79 661 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 SLC5A4Q9NY91 659 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 SAMD15Q9P1V8 674 aa5.51□□□□□ -1.53
USP53-204ENST00000507906 NPTXRO95502 500 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 GSNP06396 782 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 KIR3DL1P43629 444 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 POU4F1Q01851 419 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 MCL1Q07820 350 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 TESK1Q15569 626 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 NFE2Q16621 373 aaPredicted RBP5.5□□□□□ -1.53
USP53-204ENST00000507906 NKPD1Q17RQ9 610 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 ZNF765Q7L2R6 523 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 ZAR1Q86SH2 424 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 ALYREFQ86V81 257 aaKnown RBP5.5□□□□□ -1.53
USP53-204ENST00000507906 CLEC10AQ8IUN9 316 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 AHI1Q8N157 1196 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 IGSF22Q8N9C0 903 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 FAM181AQ8N9Y4 354 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 DAGLBQ8NCG7 672 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 RCBTB1Q8NDN9 531 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 TBC1D32Q96NH3 1257 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 CEP89Q96ST8 783 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 GPR62Q9BZJ7 368 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 C7orf69Q9H7B7 122 aa5.5□□□□□ -1.53
USP53-204ENST00000507906 PPARGC1AQ9UBK2 798 aaKnown RBP5.5□□□□□ -1.53
USP53-204ENST00000507906 GABBR1Q9UBS5 961 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms