RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 STXBP5LQ9Y2K9 1186 aa18.7■□□□□ 0.58
SSBP2-207ENST00000507472 ASTN1O14525 1302 aa18.7■□□□□ 0.58
SSBP2-207ENST00000507472 ASB14A6NK59 587 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 DCDC2CA8MYV0 355 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 ICAM1P05362 532 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 RAG1P15918 1043 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 AKNAD1Q5T1N1 836 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 FAM109BQ6ICB4 259 aaPredicted RBP18.69■□□□□ 0.58
SSBP2-207ENST00000507472 BTNL9Q6UXG8 535 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 MFSD6Q6ZSS7 791 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 VTI1AQ96AJ9 217 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 PURBQ96QR8 312 aaKnown RBP18.69■□□□□ 0.58
SSBP2-207ENST00000507472 OSBPL3Q9H4L5 887 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 GPCPD1Q9NPB8 672 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 CYP39A1Q9NYL5 469 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 ELP1O95163 1332 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 ZMYM6O95789 1325 aa18.69■□□□□ 0.58
SSBP2-207ENST00000507472 FRMPD2Q68DX3 1309 aaPredicted RBP18.69■□□□□ 0.58
SSBP2-207ENST00000507472 LTBP2Q14767 1821 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.68■□□□□ 0.58
SSBP2-207ENST00000507472 CTAGE5O15320 804 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 CDK7P50613 346 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 EPHB4P54760 987 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 TNFAIP2Q03169 654 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 SYDE2Q5VT97 1194 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 NSMFQ6X4W1 530 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 NOL8Q76FK4 1167 aaKnown RBP18.68■□□□□ 0.58
SSBP2-207ENST00000507472 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 FAM161BQ96MY7 647 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 TTC14Q96N46 770 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 RANBP17Q9H2T7 1088 aaKnown RBP18.68■□□□□ 0.58
SSBP2-207ENST00000507472 CUL9Q8IWT3 2517 aa18.68■□□□□ 0.58
SSBP2-207ENST00000507472 PCP11498 1178 aaKnown RBP18.67■□□□□ 0.58
SSBP2-207ENST00000507472 MFAP1P55081 439 aaKnown RBP18.67■□□□□ 0.58
SSBP2-207ENST00000507472 BEX3Q00994 111 aa18.67■□□□□ 0.58
SSBP2-207ENST00000507472 EEPD1Q7L9B9 569 aa18.67■□□□□ 0.58
SSBP2-207ENST00000507472 PDGFCQ9NRA1 345 aa18.67■□□□□ 0.58
SSBP2-207ENST00000507472 PDHBP11177 359 aa18.66■□□□□ 0.58
SSBP2-207ENST00000507472 PTGS1P23219 599 aa18.66■□□□□ 0.58
SSBP2-207ENST00000507472 NKX3-2P78367 333 aa18.66■□□□□ 0.58
SSBP2-207ENST00000507472 BAATQ14032 418 aaPredicted RBP18.66■□□□□ 0.58
SSBP2-207ENST00000507472 CWC27Q6UX04 472 aaKnown RBP18.66■□□□□ 0.58
SSBP2-207ENST00000507472 GUCD1Q96NT3 240 aa18.66■□□□□ 0.58
SSBP2-207ENST00000507472 GNEQ9Y223 722 aaKnown RBP18.66■□□□□ 0.58
SSBP2-207ENST00000507472 ARVCFO00192 962 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 NFIBO00712 420 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 ZNF213O14771 459 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 DYNC1LI2O43237 492 aaPredicted RBP18.65■□□□□ 0.58
SSBP2-207ENST00000507472 TIMP1P01033 207 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 SMPD1P17405 629 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 FPGSQ05932 587 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 TMEM63BQ5T3F8 832 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 TAPT1Q6NXT6 567 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 ESR2Q92731 530 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 ZKSCAN3Q9BRR0 538 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 RNF41Q9H4P4 317 aaPredicted RBP18.65■□□□□ 0.58
SSBP2-207ENST00000507472 TBX21Q9UL17 535 aa18.65■□□□□ 0.58
SSBP2-207ENST00000507472 A0A0U1RQG5 324 aaPredicted RBP18.64■□□□□ 0.57
SSBP2-207ENST00000507472 ZNF543Q08ER8 600 aa18.64■□□□□ 0.57
SSBP2-207ENST00000507472 ZNF697Q5TEC3 545 aa18.64■□□□□ 0.57
SSBP2-207ENST00000507472 IQSEC1Q6DN90 963 aa18.64■□□□□ 0.57
SSBP2-207ENST00000507472 CXCL17Q6UXB2 119 aa18.64■□□□□ 0.57
SSBP2-207ENST00000507472 FBXO16Q8IX29 292 aaPredicted RBP18.64■□□□□ 0.57
SSBP2-207ENST00000507472 MORC4Q8TE76 937 aa18.64■□□□□ 0.57
SSBP2-207ENST00000507472 AP5M1Q9H0R1 490 aa18.64■□□□□ 0.57
SSBP2-207ENST00000507472 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.57
SSBP2-207ENST00000507472 MROH7Q68CQ1 1323 aa18.64■□□□□ 0.57
SSBP2-207ENST00000507472 SNHG28P0DPA3 235 aa18.63■□□□□ 0.57
SSBP2-207ENST00000507472 SMAD3P84022 425 aaKnown RBP18.63■□□□□ 0.57
SSBP2-207ENST00000507472 FSCN1Q16658 493 aaKnown RBP18.63■□□□□ 0.57
SSBP2-207ENST00000507472 TLK2Q86UE8 772 aa18.63■□□□□ 0.57
SSBP2-207ENST00000507472 CLEC4DQ8WXI8 215 aa18.63■□□□□ 0.57
SSBP2-207ENST00000507472 RNPC3Q96LT9 517 aaKnown RBP18.63■□□□□ 0.57
SSBP2-207ENST00000507472 NEDD4P46934 1319 aa18.63■□□□□ 0.57
SSBP2-207ENST00000507472 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
SSBP2-207ENST00000507472 GOLGA8HP0CJ92 632 aa18.62■□□□□ 0.57
SSBP2-207ENST00000507472 KIAA1211Q6ZU35 1233 aa18.62■□□□□ 0.57
SSBP2-207ENST00000507472 DGKHQ86XP1 1220 aa18.62■□□□□ 0.57
SSBP2-207ENST00000507472 FAM126BQ8IXS8 530 aa18.62■□□□□ 0.57
SSBP2-207ENST00000507472 SEMA6BQ9H3T3 888 aa18.62■□□□□ 0.57
SSBP2-207ENST00000507472 VTA1Q9NP79 307 aa18.62■□□□□ 0.57
SSBP2-207ENST00000507472 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
SSBP2-207ENST00000507472 HIP1O00291 1037 aa18.61■□□□□ 0.57
SSBP2-207ENST00000507472 KDM4AO75164 1064 aa18.61■□□□□ 0.57
SSBP2-207ENST00000507472 CALML3P27482 149 aa18.61■□□□□ 0.57
SSBP2-207ENST00000507472 ALDH5A1P51649 535 aaPredicted RBP18.61■□□□□ 0.57
SSBP2-207ENST00000507472 MFSD5Q6N075 450 aa18.61■□□□□ 0.57
SSBP2-207ENST00000507472 UBA5Q9GZZ9 404 aa18.61■□□□□ 0.57
SSBP2-207ENST00000507472 PNMA2Q9UL42 364 aa18.61■□□□□ 0.57
SSBP2-207ENST00000507472 Q9Y3F1 56 aa18.61■□□□□ 0.57
SSBP2-207ENST00000507472 GRIN2DO15399 1336 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 DLL1O00548 723 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 CABYRO75952 493 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 CD4P01730 458 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 GPATCH4Q5T3I0 446 aaKnown RBP18.6■□□□□ 0.57
SSBP2-207ENST00000507472 SLC30A10Q6XR72 485 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 RNF207Q6ZRF8 634 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 C16orf59Q7L2K0 433 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 IQCA1Q86XH1 822 aa18.6■□□□□ 0.57
SSBP2-207ENST00000507472 SLC43A3Q8NBI5 491 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms