RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TFR2Q9UP52 801 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
NUP54-205ENST00000507257 CALML3P27482 149 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 COBLL1Q53SF7 1204 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 NAALADL2Q58DX5 795 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 IQCA1Q86XH1 822 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 CCSER1Q9C0I3 900 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 PLAGL2Q9UPG8 496 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 DCCP43146 1447 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 B4DLN1 442 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 PJA2O43164 708 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 SCG2P13521 617 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 CCNE1P24864 410 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 DDR1Q08345 913 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 TBC1D8BQ0IIM8 1120 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 KCNV1Q6PIU1 500 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 KDM7AQ6ZMT4 941 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.78■□□□□ 0.76
NUP54-205ENST00000507257 CD302Q8IX05 232 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 MREGQ8N565 214 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 OSBPL9Q96SU4 736 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 RUFY1Q96T51 708 aa19.78■□□□□ 0.76
NUP54-205ENST00000507257 DUSP9Q99956 384 aaKnown RBP19.78■□□□□ 0.76
NUP54-205ENST00000507257 NUP98P52948 1817 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 STARD3NLO95772 234 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 FNTAP49354 379 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 PFKFB3Q16875 520 aaPredicted RBP19.77■□□□□ 0.76
NUP54-205ENST00000507257 TTMPQ5BVD1 217 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 HAUS3Q68CZ6 603 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 PIK3AP1Q6ZUJ8 805 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 MICALCLQ6ZW33 695 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 CCDC42Q96M95 316 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 ALS2CR12Q96Q35 445 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 TSKSQ9UJT2 592 aa19.77■□□□□ 0.76
NUP54-205ENST00000507257 ZNF263O14978 683 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 MCM7P33993 719 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 RRP36Q96EU6 259 aaKnown RBP19.76■□□□□ 0.75
NUP54-205ENST00000507257 BRIP1Q9BX63 1249 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 SH3GLB2Q9NR46 395 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 MAPK8IP1Q9UQF2 711 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 MACROD2A1Z1Q3 448 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 MEFVO15553 781 aaPredicted RBP19.76■□□□□ 0.75
NUP54-205ENST00000507257 NLRP5P59047 1200 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 HLFQ16534 295 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 CSGALNACT2Q8N6G5 542 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 P2RX5Q93086 422 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 LRWD1Q9UFC0 647 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 DUSP10Q9Y6W6 482 aa19.76■□□□□ 0.75
NUP54-205ENST00000507257 ABCB11O95342 1321 aa19.75■□□□□ 0.75
NUP54-205ENST00000507257 PES1O00541 588 aaKnown RBP19.75■□□□□ 0.75
NUP54-205ENST00000507257 NDUFAB1O14561 156 aa19.75■□□□□ 0.75
NUP54-205ENST00000507257 ARHGAP27Q6ZUM4 889 aa19.75■□□□□ 0.75
NUP54-205ENST00000507257 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
NUP54-205ENST00000507257 IQCKQ8N0W5 287 aa19.75■□□□□ 0.75
NUP54-205ENST00000507257 TSEN2Q8NCE0 465 aaKnown RBP19.75■□□□□ 0.75
NUP54-205ENST00000507257 HDAC7Q8WUI4 952 aa19.75■□□□□ 0.75
NUP54-205ENST00000507257 CNOT6LQ96LI5 555 aaKnown RBP19.75■□□□□ 0.75
NUP54-205ENST00000507257 EHD4Q9H223 541 aa19.75■□□□□ 0.75
NUP54-205ENST00000507257 PCDHA13Q9Y5I0 950 aa19.75■□□□□ 0.75
NUP54-205ENST00000507257 CAPN6Q9Y6Q1 641 aa19.75■□□□□ 0.75
NUP54-205ENST00000507257 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.75■□□□□ 0.75
NUP54-205ENST00000507257 LAD1O00515 517 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 PAFAH1B1P43034 410 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 PLCB4Q15147 1175 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 EZH2Q15910 746 aaKnown RBP19.74■□□□□ 0.75
NUP54-205ENST00000507257 CCDC96Q2M329 555 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 MIIPQ5JXC2 388 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 SRBD1Q8N5C6 995 aaKnown RBP19.74■□□□□ 0.75
NUP54-205ENST00000507257 CCDC47Q96A33 483 aaKnown RBP19.74■□□□□ 0.75
NUP54-205ENST00000507257 ARL8AQ96BM9 186 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 CABS1Q96KC9 395 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 IFIH1Q9BYX4 1025 aaKnown RBP19.74■□□□□ 0.75
NUP54-205ENST00000507257 GDF3Q9NR23 364 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 TRMT112Q9UI30 125 aaKnown RBP19.74■□□□□ 0.75
NUP54-205ENST00000507257 MYH1P12882 1939 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 hCG_1642624A0A1W2PR95 340 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 MINDY4BA8MYZ0 360 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 KIAA0754O94854 1291 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 GPTP24298 496 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 FKBP15Q5T1M5 1219 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 DNAJC10Q8IXB1 793 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 IFT20Q8IY31 132 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 RNF10Q8N5U6 811 aaKnown RBP19.74■□□□□ 0.75
NUP54-205ENST00000507257 EPN3Q9H201 632 aa19.74■□□□□ 0.75
NUP54-205ENST00000507257 ERVV-1B6SEH8 477 aa19.73■□□□□ 0.75
NUP54-205ENST00000507257 PRPHP41219 470 aa19.73■□□□□ 0.75
NUP54-205ENST00000507257 CYP27A1Q02318 531 aa19.73■□□□□ 0.75
NUP54-205ENST00000507257 DTHD1Q6ZMT9 781 aa19.73■□□□□ 0.75
NUP54-205ENST00000507257 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.73■□□□□ 0.75
NUP54-205ENST00000507257 LRP2BPQ9P2M1 347 aa19.73■□□□□ 0.75
NUP54-205ENST00000507257 MYH10P35580 1976 aa19.73■□□□□ 0.75
NUP54-205ENST00000507257 MAGEB6P1A0A0J9YX57 407 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 ORC4O43929 436 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 IL2RBP14784 551 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 CYP7A1P22680 504 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 HOXA7P31268 230 aaPredicted RBP19.72■□□□□ 0.75
NUP54-205ENST00000507257 MNAT1P51948 309 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 SETQ01105 290 aaPredicted RBP19.72■□□□□ 0.75
NUP54-205ENST00000507257 DRP2Q13474 957 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 CCDC181Q5TID7 509 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms