RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 HOXC12P31275 282 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 AFMP43652 599 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 SCRN1Q12765 414 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 SF1Q15637 639 aaKnown RBP4.47□□□□□ -1.69
GYPB-207ENST00000506679 NFE2L2Q16236 605 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 LONRF2Q1L5Z9 754 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 FYB2Q5VWT5 728 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 SPPL2CQ8IUH8 684 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 KREMEN2Q8NCW0 462 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 FRS2Q8WU20 508 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 PPP1R14AQ96A00 147 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 CCDC140Q96MF4 163 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 SPATA9Q9BWV2 254 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 PIF1Q9H611 641 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 LRP2BPQ9P2M1 347 aa4.47□□□□□ -1.69
GYPB-207ENST00000506679 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.46□□□□□ -1.7
GYPB-207ENST00000506679 ARNTLO00327 626 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 BIN1O00499 593 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 CPP00450 1065 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 SEPHS1P49903 392 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 SSRP1Q08945 709 aaKnown RBP4.46□□□□□ -1.7
GYPB-207ENST00000506679 MAP4K2Q12851 820 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 HSP90AA2PQ14568 343 aaPredicted RBP4.46□□□□□ -1.7
GYPB-207ENST00000506679 BMS1Q14692 1282 aaKnown RBP4.46□□□□□ -1.7
GYPB-207ENST00000506679 SNX17Q15036 470 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 HSF5Q4G112 596 aaPredicted RBP4.46□□□□□ -1.7
GYPB-207ENST00000506679 SLC35F1Q5T1Q4 408 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 ACBD5Q5T8D3 534 aaPredicted RBP4.46□□□□□ -1.7
GYPB-207ENST00000506679 HLA-DQA1Q5Y7H0 255 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 DENND5AQ6IQ26 1287 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 NLRX1Q86UT6 975 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 MYLIPQ8WY64 445 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 KIRREL1Q96J84 757 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 MMP19Q99542 508 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 DNAJC7Q99615 494 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 AARSD1Q9BTE6 412 aaKnown RBP4.46□□□□□ -1.7
GYPB-207ENST00000506679 ZSWIM4Q9H7M6 989 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 USP35Q9P2H5 1018 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 CARMIL2Q6F5E8 1435 aa4.46□□□□□ -1.7
GYPB-207ENST00000506679 TRBV23OR9-2A0A075B6M9 112 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 DLX3O60479 287 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 PSPNO60542 156 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 IGSF3O75054 1194 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 TBC1D8O95759 1140 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 SNRPB2P08579 225 aaKnown RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 RAC2P15153 192 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 TAL1P17542 331 aaPredicted RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 TRHRP34981 398 aaPredicted RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 CORO7P57737 925 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 RTP1P59025 263 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 IFRD2Q12894 506 aaPredicted RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 YOD1Q5VVQ6 348 aaPredicted RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 E4F1Q66K89 784 aaPredicted RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 MBLAC2Q68D91 279 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 MCTP1Q6DN14 999 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 CEP128Q6ZU80 1094 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 ZSWIM9Q86XI8 627 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 KSR1Q8IVT5 923 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 CCDC103Q8IW40 242 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 LILRB2Q8N423 598 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 NAT16Q8N8M0 369 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 ZBTB38Q8NAP3 1195 aaPredicted RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 TMEM145Q8NBT3 493 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 NLGN2Q8NFZ4 835 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 ABHD4Q8TB40 342 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 OSBP2Q969R2 916 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 ASIC4Q96FT7 647 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 JMJD8Q96S16 334 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 PLCD4Q9BRC7 762 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 IER2Q9BTL4 223 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 C19orf44Q9H6X5 657 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 CWC22Q9HCG8 908 aaKnown RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 GPRC5CQ9NQ84 441 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 PFDN2Q9UHV9 154 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 ACSL6Q9UKU0 697 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 NPFFR2Q9Y5X5 522 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.45□□□□□ -1.7
GYPB-207ENST00000506679 KDM2BQ8NHM5 1336 aa4.45□□□□□ -1.7
GYPB-207ENST00000506679 TRAV20A0A0B4J274 112 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 NPHP3-ACAD11A0A0J9YXS1 232 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 WTIPA6NIX2 430 aaPredicted RBP4.44□□□□□ -1.7
GYPB-207ENST00000506679 GLI1P08151 1106 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 FAM153BP0C7A2 387 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 PABPC1P11940 636 aaKnown RBP4.44□□□□□ -1.7
GYPB-207ENST00000506679 PLS3P13797 630 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 PAMP19021 973 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 PRSS53Q2L4Q9 553 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 C2orf27AQ580R0 203 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 FOXB2Q5VYV0 432 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 GALNT18Q6P9A2 607 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 THAP3Q8WTV1 239 aaPredicted RBP4.44□□□□□ -1.7
GYPB-207ENST00000506679 KCTD13Q8WZ19 329 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 FAM168AQ92567 244 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 RNF32Q9H0A6 362 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 CRTAC1Q9NQ79 661 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 CLEC1BQ9P126 229 aa4.44□□□□□ -1.7
GYPB-207ENST00000506679 TMEFF2Q9UIK5 374 aaPredicted RBP4.44□□□□□ -1.7
GYPB-207ENST00000506679 YBX2Q9Y2T7 364 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms