RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 PDE1AP54750 535 aa17.2■□□□□ 0.34
SEC24D-208ENST00000506622 BEX3Q00994 111 aa17.2■□□□□ 0.34
SEC24D-208ENST00000506622 PPIGQ13427 754 aaKnown RBP eCLIP17.2■□□□□ 0.341e-8■□□□□ 9.5
SEC24D-208ENST00000506622 ALX1Q15699 326 aa17.2■□□□□ 0.34
SEC24D-208ENST00000506622 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
SEC24D-208ENST00000506622 MAFAQ8NHW3 353 aaPredicted RBP17.2■□□□□ 0.34
SEC24D-208ENST00000506622 DCAF4Q8WV16 495 aa17.2■□□□□ 0.34
SEC24D-208ENST00000506622 MYLIPQ8WY64 445 aa17.2■□□□□ 0.34
SEC24D-208ENST00000506622 CYP39A1Q9NYL5 469 aa17.2■□□□□ 0.34
SEC24D-208ENST00000506622 SPTBN5Q9NRC6 3674 aaKnown RBP17.19■□□□□ 0.34
SEC24D-208ENST00000506622 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.19■□□□□ 0.34
SEC24D-208ENST00000506622 CABYRO75952 493 aa17.19■□□□□ 0.34
SEC24D-208ENST00000506622 NKX3-2P78367 333 aa17.19■□□□□ 0.34
SEC24D-208ENST00000506622 MCMDC2Q4G0Z9 681 aa17.19■□□□□ 0.34
SEC24D-208ENST00000506622 MUM1L1Q5H9M0 696 aa17.19■□□□□ 0.34
SEC24D-208ENST00000506622 RRP12Q5JTH9 1297 aaKnown RBP17.19■□□□□ 0.34
SEC24D-208ENST00000506622 NSMFQ6X4W1 530 aa17.19■□□□□ 0.34
SEC24D-208ENST00000506622 TMEM199Q8N511 208 aa17.19■□□□□ 0.34
SEC24D-208ENST00000506622 CTAGE5O15320 804 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 ZEB2O60315 1214 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 FGAP02671 866 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 ICAM1P05362 532 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 FGRP09769 529 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 FOSL2P15408 326 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 NOVP48745 357 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 FSCN1Q16658 493 aaKnown RBP17.18■□□□□ 0.34
SEC24D-208ENST00000506622 IQSEC1Q6DN90 963 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 CXCL17Q6UXB2 119 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 RASGRP2Q7LDG7 609 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 TLK2Q86UE8 772 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 FAM126BQ8IXS8 530 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 TTC28Q96AY4 2481 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.18■□□□□ 0.342e-7■□□□□ 11
SEC24D-208ENST00000506622 PPP1R12CQ9BZL4 782 aa17.18■□□□□ 0.34
SEC24D-208ENST00000506622 GNEQ9Y223 722 aaKnown RBP17.18■□□□□ 0.34
SEC24D-208ENST00000506622 CHD9Q3L8U1 2897 aa17.17■□□□□ 0.34
SEC24D-208ENST00000506622 ASTN1O14525 1302 aa17.17■□□□□ 0.34
SEC24D-208ENST00000506622 DYNC1LI2O43237 492 aaPredicted RBP17.17■□□□□ 0.34
SEC24D-208ENST00000506622 TOP1P11387 765 aaKnown RBP17.17■□□□□ 0.34
SEC24D-208ENST00000506622 SMPD1P17405 629 aa17.17■□□□□ 0.34
SEC24D-208ENST00000506622 SLC16A2P36021 539 aa17.17■□□□□ 0.34
SEC24D-208ENST00000506622 HDAC1Q13547 482 aaPredicted RBP17.17■□□□□ 0.34
SEC24D-208ENST00000506622 EEPD1Q7L9B9 569 aa17.17■□□□□ 0.34
SEC24D-208ENST00000506622 FAM227BQ96M60 508 aa17.17■□□□□ 0.34
SEC24D-208ENST00000506622 COL25A1Q9BXS0 654 aaPredicted RBP17.17■□□□□ 0.34
SEC24D-208ENST00000506622 RANBP17Q9H2T7 1088 aaKnown RBP17.17■□□□□ 0.34
SEC24D-208ENST00000506622 ADD3Q9UEY8 706 aaKnown RBP17.17■□□□□ 0.34
SEC24D-208ENST00000506622 HSPD1P10809 573 aaKnown RBP17.16■□□□□ 0.34
SEC24D-208ENST00000506622 CSF2RAP15509 400 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 DNAJB2P25686 324 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 TMEM240Q5SV17 173 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 SYDE2Q5VT97 1194 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 TTBK2Q6IQ55 1244 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 TAPT1Q6NXT6 567 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 KIAA1211Q6ZU35 1233 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 FBXO16Q8IX29 292 aaPredicted RBP17.16■□□□□ 0.34
SEC24D-208ENST00000506622 TMEM47Q9BQJ4 181 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 SEZ6LQ9BYH1 1024 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 VTA1Q9NP79 307 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 PDGFCQ9NRA1 345 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 TCP11L1Q9NUJ3 509 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 Q9Y3F1 56 aa17.16■□□□□ 0.34
SEC24D-208ENST00000506622 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
SEC24D-208ENST00000506622 A0A0D9SFI3 127 aa17.15■□□□□ 0.34
SEC24D-208ENST00000506622 TRIM6-TRIM34B2RNG4 842 aa17.15■□□□□ 0.34
SEC24D-208ENST00000506622 CD4P01730 458 aa17.15■□□□□ 0.34
SEC24D-208ENST00000506622 ITGA7Q13683 1181 aa17.15■□□□□ 0.34
SEC24D-208ENST00000506622 BAATQ14032 418 aaPredicted RBP17.15■□□□□ 0.34
SEC24D-208ENST00000506622 PSRC1Q6PGN9 363 aaPredicted RBP17.15■□□□□ 0.34
SEC24D-208ENST00000506622 C16orf59Q7L2K0 433 aa17.15■□□□□ 0.34
SEC24D-208ENST00000506622 SLC43A3Q8NBI5 491 aa17.15■□□□□ 0.34
SEC24D-208ENST00000506622 GPCPD1Q9NPB8 672 aa17.15■□□□□ 0.34
SEC24D-208ENST00000506622 FRMPD2Q68DX3 1309 aaPredicted RBP17.14■□□□□ 0.33
SEC24D-208ENST00000506622 ACRP10323 421 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 CYP2C18P33260 490 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
SEC24D-208ENST00000506622 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 TIFAQ96CG3 184 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 TTC14Q96N46 770 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 PURBQ96QR8 312 aaKnown RBP17.14■□□□□ 0.33
SEC24D-208ENST00000506622 ZNF576Q9H609 170 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 PNMA2Q9UL42 364 aa17.14■□□□□ 0.33
SEC24D-208ENST00000506622 LCTP09848 1927 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 ZMYM6O95789 1325 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 LOC102724159A0A0B4J2E5 919 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 PCP11498 1178 aaKnown RBP17.13■□□□□ 0.33
SEC24D-208ENST00000506622 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
SEC24D-208ENST00000506622 HAND2P61296 217 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 GRIN2CQ14957 1233 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 PWP2Q15269 919 aaKnown RBP17.13■□□□□ 0.33
SEC24D-208ENST00000506622 MORC4Q8TE76 937 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 HIPK3Q9H422 1215 aa17.13■□□□□ 0.33
SEC24D-208ENST00000506622 IL23AQ9NPF7 189 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms