RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 TRIM14Q14142 442 aa12.77□□□□□ -0.37
NFKB1-205ENST00000505458 ISM2Q6H9L7 571 aa12.77□□□□□ -0.37
NFKB1-205ENST00000505458 FAM151AQ8WW52 585 aa12.77□□□□□ -0.37
NFKB1-205ENST00000505458 UBA5Q9GZZ9 404 aa12.77□□□□□ -0.37
NFKB1-205ENST00000505458 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
NFKB1-205ENST00000505458 KDM3AQ9Y4C1 1321 aa12.77□□□□□ -0.37
NFKB1-205ENST00000505458 TGFB2P61812 414 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 SEPT2Q15019 361 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 IL17AQ16552 155 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 SPECC1LQ69YQ0 1117 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 KCTD17Q8N5Z5 321 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 IGSF22Q8N9C0 903 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 CLK2P49760 499 aaKnown RBP12.76□□□□□ -0.37
NFKB1-205ENST00000505458 USP11P51784 963 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 CDKAL1Q5VV42 579 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 MTERF4Q7Z6M4 381 aaKnown RBP12.76□□□□□ -0.37
NFKB1-205ENST00000505458 CCDC125Q86Z20 511 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 LARGE2Q8N3Y3 721 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 MYRIPQ8NFW9 859 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 A0A1B0GTH6 734 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 PSMA7O14818 248 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 TBC1D12O60347 775 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 RHOBTB3O94955 611 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 DLGAP5Q15398 846 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 FAM83AQ86UY5 434 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 CCDC51Q96ER9 411 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 PSTPIP2Q9H939 334 aa12.76□□□□□ -0.37
NFKB1-205ENST00000505458 H7C1D1 291 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 EEF2P13639 858 aaKnown RBP12.75□□□□□ -0.37
NFKB1-205ENST00000505458 ATP2B2Q01814 1243 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 CNNM4Q6P4Q7 775 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 FOXR2Q6PJQ5 311 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 FAM114A1Q8IWE2 563 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 NIM1KQ8IY84 436 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 DHTKD1Q96HY7 919 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-205ENST00000505458 CDK5RAP3Q96JB5 506 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 MTMR9Q96QG7 549 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 AMNQ9BXJ7 453 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 NAA15Q9BXJ9 866 aaKnown RBP12.75□□□□□ -0.37
NFKB1-205ENST00000505458 TMEM60Q9H2L4 133 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 DNAJC18Q9H819 358 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 ITIH6Q6UXX5 1313 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 GTF2F1P35269 517 aaKnown RBP eCLIP12.75□□□□□ -0.37
NFKB1-205ENST00000505458 LRMPQ12912 555 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 GRAMD1CQ8IYS0 662 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 DDTLA6NHG4 134 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-205ENST00000505458 ATP1A3P13637 1013 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 FMR1Q06787 632 aaKnown RBP eCLIP12.75□□□□□ -0.37
NFKB1-205ENST00000505458 JAKMIP3Q5VZ66 844 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 NT5C3AQ9H0P0 336 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 BIN2Q9UBW5 565 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-205ENST00000505458 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
NFKB1-205ENST00000505458 TBX3O15119 743 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 ZSCAN12O43309 604 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 C21orf2O43822 256 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 KARSQ15046 597 aaKnown RBP12.74□□□□□ -0.37
NFKB1-205ENST00000505458 KRT79Q5XKE5 535 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 SLFN12Q8IYM2 578 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 IQCDQ96DY2 449 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 LIMA1Q9UHB6 759 aaKnown RBP12.74□□□□□ -0.37
NFKB1-205ENST00000505458 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.74□□□□□ -0.37
NFKB1-205ENST00000505458 ARHGAP6O43182 974 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 PLA2G6O60733 806 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 CSRNP1Q96S65 589 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 GMLQ99445 158 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 LRWD1Q9UFC0 647 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 PVALEFA0A1B0GWK0 134 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 EEF1GP26641 437 aaKnown RBP12.74□□□□□ -0.37
NFKB1-205ENST00000505458 TNNI2P48788 182 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
NFKB1-205ENST00000505458 TCP10Q12799 353 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 PTPN14Q15678 1187 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 MAP7D2Q96T17 732 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 EHMT1Q9H9B1 1298 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 PNMA2Q9UL42 364 aa12.74□□□□□ -0.37
NFKB1-205ENST00000505458 BMP3P12645 472 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-205ENST00000505458 CDC37Q16543 378 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-205ENST00000505458 SYDE2Q5VT97 1194 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 SV2BQ7L1I2 683 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 SH3BP5LQ7L8J4 393 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 CCAR2Q8N163 923 aaKnown RBP12.73□□□□□ -0.37
NFKB1-205ENST00000505458 THAP9Q9H5L6 903 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 EXOC1Q9NV70 894 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 RGS17Q9UGC6 210 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-205ENST00000505458 STX10O60499 249 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 FGFR1OPO95684 399 aaKnown RBP12.73□□□□□ -0.37
NFKB1-205ENST00000505458 NR1I3Q14994 352 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 COA7Q96BR5 231 aa12.73□□□□□ -0.37
NFKB1-205ENST00000505458 TDRD3Q9H7E2 651 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms