RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PASKQ96RG2 1323 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 UNCXA6NJT0 531 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
TPM3-217ENST00000504663 KIF3CO14782 793 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 NCLP19338 710 aaKnown RBP11.91□□□□□ -0.5
TPM3-217ENST00000504663 ADCY7P51828 1080 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 CEBPZQ03701 1054 aaKnown RBP11.91□□□□□ -0.5
TPM3-217ENST00000504663 RILPL1Q5EBL4 403 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 CATSPERGQ6ZRH7 1159 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 FBXO11Q86XK2 927 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 C4orf32Q8N8J7 132 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 ZNF526Q8TF50 670 aaPredicted RBP11.91□□□□□ -0.5
TPM3-217ENST00000504663 CCDC12Q8WUD4 166 aaPredicted RBP11.91□□□□□ -0.5
TPM3-217ENST00000504663 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 SPATA32Q96LK8 384 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 AMNQ9BXJ7 453 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 GOLPH3LQ9H4A5 285 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 PCDHA1Q9Y5I3 950 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 MRVI1Q9Y6F6 885 aa11.91□□□□□ -0.5
TPM3-217ENST00000504663 MYPNQ86TC9 1320 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 CXCL11O14625 94 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 ICAM1P05362 532 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 PTMSP20962 102 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 UBE2HP62256 183 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 FKBP1BP68106 108 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 GRIN1Q05586 938 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 CCDC174Q6PII3 467 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 ARMC9Q7Z3E5 817 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 KRT25Q7Z3Z0 450 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 PRPF38AQ8NAV1 312 aaKnown RBP11.9□□□□□ -0.5
TPM3-217ENST00000504663 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
TPM3-217ENST00000504663 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
TPM3-217ENST00000504663 CLEC4DQ8WXI8 215 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 TBC1D5Q92609 795 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 GBA2Q9HCG7 927 aaPredicted RBP11.9□□□□□ -0.5
TPM3-217ENST00000504663 BRMS1Q9HCU9 246 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 C6orf50Q9HD87 102 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.5
TPM3-217ENST00000504663 FBXO2Q9UK22 296 aaPredicted RBP11.9□□□□□ -0.5
TPM3-217ENST00000504663 CFAP45Q9UL16 551 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 ZNF214Q9UL59 606 aaPredicted RBP11.9□□□□□ -0.5
TPM3-217ENST00000504663 ISY1Q9ULR0 285 aaKnown RBP11.9□□□□□ -0.5
TPM3-217ENST00000504663 PCDHA7Q9UN72 937 aa11.9□□□□□ -0.5
TPM3-217ENST00000504663 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 VWA5AO00534 786 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 SPTLC2O15270 562 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 PPP6R2O75170 966 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 FLOT1O75955 427 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 LIG1P18858 919 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 GNA11P29992 359 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 HOXA7P31268 230 aaPredicted RBP11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 IKQ13123 557 aaPredicted RBP11.89□□□□□ -0.51
TPM3-217ENST00000504663 IL17AQ16552 155 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 INF2Q27J81 1249 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USH1GQ495M9 461 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 TTC38Q5R3I4 469 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 JAKMIP3Q5VZ66 844 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 USP17L6PQ6QN14 398 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 REXO1Q8N1G1 1221 aaKnown RBP11.89□□□□□ -0.51
TPM3-217ENST00000504663 CUL5Q93034 780 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 TANGO6Q9C0B7 1094 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 TMEM63CQ9P1W3 806 aa11.89□□□□□ -0.51
TPM3-217ENST00000504663 ABCB11O95342 1321 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 CNMDO75829 334 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 CELF2O95319 508 aaKnown RBP11.88□□□□□ -0.51
TPM3-217ENST00000504663 PTPREP23469 700 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
TPM3-217ENST00000504663 GNL2Q13823 731 aaKnown RBP11.88□□□□□ -0.51
TPM3-217ENST00000504663 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
TPM3-217ENST00000504663 LBX2Q6XYB7 198 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 ENGASEQ8NFI3 743 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 KCNG4Q8TDN1 519 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 TMEM60Q9H2L4 133 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 PSTPIP2Q9H939 334 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 ZNF408Q9H9D4 720 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 COL20A1Q9P218 1284 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
TPM3-217ENST00000504663 FRMPD4Q14CM0 1322 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 RPTORQ8N122 1335 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 A0A1W2PQ27 194 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 A0A1W2PQ64 194 aa11.87□□□□□ -0.51
TPM3-217ENST00000504663 A0A1W2PQD8 194 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms