RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 STX8Q9UNK0 236 aa9.47□□□□□ -0.89
RFC1-207ENST00000504554 RIPK3Q9Y572 518 aa9.47□□□□□ -0.89
RFC1-207ENST00000504554 RBBP6Q7Z6E9 1792 aaKnown RBP9.46□□□□□ -0.9
RFC1-207ENST00000504554 HIP1O00291 1037 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 SGPL1O95470 568 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 OATP04181 439 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 BMP3P12645 472 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 ADORA2AP29274 412 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 CCND3P30281 292 aaPredicted RBP9.46□□□□□ -0.9
RFC1-207ENST00000504554 SNAP25P60880 206 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 TTBK2Q6IQ55 1244 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 KCTD1Q719H9 257 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 RIOX2Q8IUF8 465 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 CCAR1Q8IX12 1150 aaKnown RBP9.46□□□□□ -0.9
RFC1-207ENST00000504554 SHCBP1Q8NEM2 672 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 TRPV1Q8NER1 839 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 KIFC2Q96AC6 838 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 DEFB118Q96PH6 123 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 PHOX2BQ99453 314 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 TMEM47Q9BQJ4 181 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 ZKSCAN3Q9BRR0 538 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.46□□□□□ -0.9
RFC1-207ENST00000504554 TOMM22Q9NS69 142 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 TCP11L1Q9NUJ3 509 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 MTMR7Q9Y216 660 aa9.46□□□□□ -0.9
RFC1-207ENST00000504554 PARP14Q460N5 1801 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 TMEM232C9JQI7 657 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 ZNF213O14771 459 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 SGSM2O43147 1006 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 RNF40O75150 1001 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 PGK2P07205 417 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 HOXC6P09630 235 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 ZKSCAN1P17029 563 aaPredicted RBP9.45□□□□□ -0.9
RFC1-207ENST00000504554 CYP2C19P33261 490 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 STAT3P40763 770 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 MFAP1P55081 439 aaKnown RBP9.45□□□□□ -0.9
RFC1-207ENST00000504554 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
RFC1-207ENST00000504554 MFSD6Q6ZSS7 791 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 CENPQQ7L2Z9 268 aaPredicted RBP9.45□□□□□ -0.9
RFC1-207ENST00000504554 DIS3LQ8TF46 1054 aaKnown RBP9.45□□□□□ -0.9
RFC1-207ENST00000504554 GMCL1Q96IK5 515 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 SLC38A10Q9HBR0 1119 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 CWC22Q9HCG8 908 aaKnown RBP9.45□□□□□ -0.9
RFC1-207ENST00000504554 RAVER2Q9HCJ3 691 aaKnown RBP9.45□□□□□ -0.9
RFC1-207ENST00000504554 FEM1BQ9UK73 627 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 SYNPO2Q9UMS6 1093 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 ZNF536O15090 1300 aa9.45□□□□□ -0.9
RFC1-207ENST00000504554 KIAA0100Q14667 2235 aaKnown RBP9.44□□□□□ -0.9
RFC1-207ENST00000504554 B4E1Z4 1266 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 KDM4AO75164 1064 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 CLCN1P35523 988 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 SLC1A4P43007 532 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 PRAMEF19Q5SWL8 479 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 SNRNP48Q6IEG0 339 aaKnown RBP9.44□□□□□ -0.9
RFC1-207ENST00000504554 CPXCR1Q8N123 301 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 PRPF38AQ8NAV1 312 aaKnown RBP9.44□□□□□ -0.9
RFC1-207ENST00000504554 AGBL1Q96MI9 1066 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 MROH8Q9H579 483 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 IL21Q9HBE4 155 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 RPTORQ8N122 1335 aa9.44□□□□□ -0.9
RFC1-207ENST00000504554 FRMPD2Q68DX3 1309 aaPredicted RBP9.43□□□□□ -0.9
RFC1-207ENST00000504554 RAD50Q92878 1312 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 ATP2A1O14983 1001 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 STRNO43815 780 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 SLC25A27O95847 323 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 TFRCP02786 760 aaKnown RBP9.43□□□□□ -0.9
RFC1-207ENST00000504554 CYP21A2P08686 494 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 TOP1P11387 765 aaKnown RBP9.43□□□□□ -0.9
RFC1-207ENST00000504554 SLC16A2P36021 539 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 ZNF792Q3KQV3 632 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 Q6ZNB5 142 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 STOX1Q6ZVD7 989 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 CYB5R4Q7L1T6 521 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 DPP9Q86TI2 863 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 METTL3Q86U44 580 aaKnown RBP9.43□□□□□ -0.9
RFC1-207ENST00000504554 ABRAQ8N0Z2 381 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 ZNF516Q92618 1163 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 MAML3Q96JK9 1138 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 FGD4Q96M96 766 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 MMP19Q99542 508 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 TEX13BQ9BXU2 312 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 HMX1Q9NP08 348 aaPredicted RBP9.43□□□□□ -0.9
RFC1-207ENST00000504554 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 ZSWIM5Q9P217 1185 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 PRR12Q9ULL5 1215 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 IVNS1ABPQ9Y6Y0 642 aa9.43□□□□□ -0.9
RFC1-207ENST00000504554 PLA2G6O60733 806 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 ZBED4O75132 1171 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 FARP2O94887 1054 aaPredicted RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 SNHG28P0DPA3 235 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 PDHBP11177 359 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 PCP11498 1178 aaKnown RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 FCER1AP12319 257 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 CYBAP13498 195 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 STAT2P52630 851 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 IMMTQ16891 758 aaKnown RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 SWT1Q5T5J6 900 aaKnown RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 CCDC174Q6PII3 467 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms