RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 RAET1EQ8TD07 263 aa6.39□□□□□ -1.39
OTUD4-204ENST00000504331 COL26A1Q96A83 441 aa6.39□□□□□ -1.39
OTUD4-204ENST00000504331 CWC25Q9NXE8 425 aaPredicted RBP6.39□□□□□ -1.39
OTUD4-204ENST00000504331 SRRDQ9UH36 339 aa6.39□□□□□ -1.39
OTUD4-204ENST00000504331 MINPP1Q9UNW1 487 aa6.39□□□□□ -1.39
OTUD4-204ENST00000504331 PTCH2Q9Y6C5 1203 aa6.39□□□□□ -1.39
OTUD4-204ENST00000504331 ASTN2O75129 1339 aaPredicted RBP6.39□□□□□ -1.39
OTUD4-204ENST00000504331 CEP290O15078 2479 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 CCL15-CCL14A0A0B4J2E2 113 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 WDR64B1ANS9 1081 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 TGFBR3LH3BV60 316 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 TM4SF5O14894 197 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 NCLP19338 710 aaKnown RBP6.38□□□□□ -1.39
OTUD4-204ENST00000504331 NRLP54845 237 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 RIPK4P57078 832 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 NEXNQ0ZGT2 675 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 CCL15Q16663 113 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 FKBP1CQ5VVH2 108 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 DCAF15Q66K64 600 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 ACAD11Q709F0 780 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 SND1Q7KZF4 910 aaKnown RBP eCLIP6.38□□□□□ -1.39
OTUD4-204ENST00000504331 CLEC10AQ8IUN9 316 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 OPTNQ96CV9 577 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 POM121Q96HA1 1249 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 MPHOSPH8Q99549 860 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 FAM83CQ9BQN1 747 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 THUMPD2Q9BTF0 503 aaKnown RBP6.38□□□□□ -1.39
OTUD4-204ENST00000504331 KCNK4Q9NYG8 393 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 KIAA1024Q9UPX6 916 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 CHMP3Q9Y3E7 222 aa6.38□□□□□ -1.39
OTUD4-204ENST00000504331 DLG5Q8TDM6 1919 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 SASH1O94885 1247 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 PAPLNO95428 1278 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 PRNPP04156 253 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 ZNF865P0CJ78 1059 aaPredicted RBP6.37□□□□□ -1.39
OTUD4-204ENST00000504331 RARAP10276 462 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 PPATQ06203 517 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 NCOA4Q13772 614 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 HIF1AQ16665 826 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 PRAMEF18Q5VWM3 479 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 C17orf99Q6UX52 265 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 ZNF804AQ7Z570 1209 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 NECAB2Q7Z6G3 386 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 ANKRD23Q86SG2 305 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 TPCN2Q8NHX9 752 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 PTPN18Q99952 460 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 PLA2G12BQ9BX93 195 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 RNF208Q9H0X6 261 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 CD209Q9NNX6 404 aa6.37□□□□□ -1.39
OTUD4-204ENST00000504331 ECM29Q5VYK3 1845 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 J3QW42 95 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 SASH3O75995 380 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 FARP2O94887 1054 aaPredicted RBP6.36□□□□□ -1.39
OTUD4-204ENST00000504331 IL1R1P14778 569 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 INPP5BP32019 993 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 KCNJ4P48050 445 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 FCGRTP55899 365 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 CTSWP56202 376 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 PPIL2Q13356 520 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 PRKG1Q13976 671 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 RASA3Q14644 834 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 PROSER3Q2NL68 480 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 CFAP100Q494V2 611 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 FAM83AQ86UY5 434 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 KIAA0825Q8IV33 1275 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 TTLL11Q8NHH1 800 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 U2AF1L4Q8WU68 220 aaKnown RBP6.36□□□□□ -1.39
OTUD4-204ENST00000504331 GDF15Q99988 308 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 METTL22Q9BUU2 404 aaPredicted RBP6.36□□□□□ -1.39
OTUD4-204ENST00000504331 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 SEC31BQ9NQW1 1179 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 CHPF2Q9P2E5 772 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 BIN2Q9UBW5 565 aaPredicted RBP6.36□□□□□ -1.39
OTUD4-204ENST00000504331 SLC45A1Q9Y2W3 748 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 SUGT1Q9Y2Z0 365 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 RIPOR2Q9Y4F9 1068 aa6.36□□□□□ -1.39
OTUD4-204ENST00000504331 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
OTUD4-204ENST00000504331 WTIPA6NIX2 430 aaPredicted RBP6.35□□□□□ -1.39
OTUD4-204ENST00000504331 CXCL11O14625 94 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 CCL5P13501 91 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 TMPOP42166 694 aaKnown RBP6.35□□□□□ -1.39
OTUD4-204ENST00000504331 PSMC4P43686 418 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 NBPF12Q5TAG4 269 aaPredicted RBP6.35□□□□□ -1.39
OTUD4-204ENST00000504331 CCDC30Q5VVM6 783 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 BEND4Q6ZU67 534 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 FASTKD5Q7L8L6 764 aaKnown RBP6.35□□□□□ -1.39
OTUD4-204ENST00000504331 TDHQ8IZJ6 230 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 DEFB123Q8N688 67 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.35□□□□□ -1.39
OTUD4-204ENST00000504331 TBC1D22AQ8WUA7 517 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 BRI3BPQ8WY22 251 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 CALR3Q96L12 384 aaKnown RBP6.35□□□□□ -1.39
OTUD4-204ENST00000504331 FBXL18Q96ME1 805 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 PARK7Q99497 189 aaKnown RBP6.35□□□□□ -1.39
OTUD4-204ENST00000504331 MTMR10Q9NXD2 777 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 TMOD2Q9NZR1 351 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 TRIM33Q9UPN9 1127 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 COG6Q9Y2V7 657 aa6.35□□□□□ -1.39
OTUD4-204ENST00000504331 MKI67P46013 3256 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms