RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 TKFCQ3LXA3 575 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 MCTP1Q6DN14 999 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 KCTD13Q8WZ19 329 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 SLAMF8Q9P0V8 285 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 PCDHA11Q9Y5I1 949 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 CD2APQ9Y5K6 639 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 FKTNO75072 461 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 SYPP08247 313 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 GSTM1P09488 218 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 FGFR1P11362 822 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 ITGB5P18084 799 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 HOXC12P31275 282 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 GDNFP39905 211 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 SUMO1P63165 101 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 SYNPOQ8N3V7 929 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 USHBP1Q8N6Y0 703 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 FLAD1Q8NFF5 587 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 CCDC140Q96MF4 163 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 NKX2-4Q9H2Z4 354 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 TMEM59LQ9UK28 342 aa7.07□□□□□ -1.28
TRAPPC13-205ENST00000504243 PPM1GO15355 546 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 RAPGEF3O95398 923 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 ENDOUP21128 410 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 CTSKP43235 329 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 AFMP43652 599 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 SEPHS1P49903 392 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 SCRN1Q12765 414 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 CBX2Q14781 532 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 PRSS53Q2L4Q9 553 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 USP53Q70EK8 1073 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 FILIP1Q7Z7B0 1213 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 LINC00116Q8NCU8 138 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 CDADC1Q9BWV3 514 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 CYP26B1Q9NR63 512 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 CTNND2Q9UQB3 1225 aa7.06□□□□□ -1.28
TRAPPC13-205ENST00000504243 BLACEA4D250 179 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 C2orf71A6NGG8 1288 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 CPP00450 1065 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 APPP05067 770 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 TEKQ02763 1124 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 DUSP4Q13115 394 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 RALGPS1Q5JS13 557 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 KIAA0907Q7Z7F0 614 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 KSR1Q8IVT5 923 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 TMEM145Q8NBT3 493 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 OSBP2Q969R2 916 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 ASIC4Q96FT7 647 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 FOXP3Q9BZS1 431 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 ADAMTS10Q9H324 1103 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 NDOR1Q9UHB4 597 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 TCFL5Q9UL49 500 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 BACE2Q9Y5Z0 518 aa7.05□□□□□ -1.28
TRAPPC13-205ENST00000504243 DNAJC25-GNG10A0A024R161 153 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 DLX3O60479 287 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 DNAJC6O75061 913 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 RAC2P15153 192 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 IFNGR1P15260 489 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 VAV1P15498 845 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 IBSPP21815 317 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 BMP8BP34820 402 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 GFRA1P56159 465 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 PABPC4Q13310 644 aaKnown RBP eCLIP7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 DHX37Q8IY37 1157 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 NAT16Q8N8M0 369 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 KISS1RQ969F8 398 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 FCRL3Q96P31 734 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 SPC25Q9HBM1 224 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 NCOA5Q9HCD5 579 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 GPRC5CQ9NQ84 441 aa7.04□□□□□ -1.28
TRAPPC13-205ENST00000504243 IRS4O14654 1257 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 PLD2O14939 933 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 PAPLNO95428 1278 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 ZGLP1P0C6A0 271 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 RPL10P27635 214 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 SPPL2CQ8IUH8 684 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 NIM1KQ8IY84 436 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 OXR1Q8N573 874 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 PDZD8Q8NEN9 1154 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 PUS7Q96PZ0 661 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 SLC12A9Q9BXP2 914 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 C19orf73Q9NVV2 129 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 SFMBT1Q9UHJ3 866 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 PLAAQ9Y263 795 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 ZNF281Q9Y2X9 895 aa7.03□□□□□ -1.28
TRAPPC13-205ENST00000504243 AURKAO14965 403 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 PAX4O43316 350 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 THBDP07204 575 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 HMGB1P09429 215 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 HK2P52789 917 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 MAP4K2Q12851 820 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 DALRD3Q5D0E6 543 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 WAPLQ7Z5K2 1190 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 PPIL6Q8IXY8 311 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 AP5S1Q9NUS5 200 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 IFT57Q9NWB7 429 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 CLEC1BQ9P126 229 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 PRKAB1Q9Y478 270 aa7.02□□□□□ -1.29
TRAPPC13-205ENST00000504243 FITM1A5D6W6 292 aa7.01□□□□□ -1.29
TRAPPC13-205ENST00000504243 MEFVO15553 781 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms