RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 H2AFZP0C0S5 128 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 H2AFVQ71UI9 128 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 PCDHA5Q9Y5H7 936 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 XDHP47989 1333 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 SH3BP5O60239 455 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 GPATCH4Q5T3I0 446 aaKnown RBP18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 LMNTD2Q8IXW0 634 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 AK8Q96MA6 479 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 PRR36Q9H6K5 1346 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 A0A1B0GUA9 196 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 RNF40O75150 1001 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 CRKLP46109 303 aaKnown RBP18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 PDE6CP51160 858 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 CUL4AQ13619 759 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 ASPRV1Q53RT3 343 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 RSAD2Q8WXG1 361 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 ATP2A3Q93084 1043 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 CSADQ9Y600 493 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 GOLGA8KD6RF30 607 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 RIC8AQ9NPQ8 531 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 PCDHA4Q9UN74 947 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 PCDHA1Q9Y5I3 950 aa18.15■□□□□ 0.5
PCDHA1-203ENST00000504120 SCNN1DP51172 638 aa18.14■□□□□ 0.5
PCDHA1-203ENST00000504120 HADHQ16836 314 aaKnown RBP18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 USPL1Q5W0Q7 1092 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 KIAA0825Q8IV33 1275 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 IKBKBO14920 756 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 ZNF853P0CG23 659 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 PCK1P35558 622 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 AOC3Q16853 763 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 ABCA9Q8IUA7 1624 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 TNNC2P02585 160 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 GUCY2FP51841 1108 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 ARHGEF2Q92974 986 aaKnown RBP18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 RABEP2Q9H5N1 569 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 M0R2C6 588 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 BUB1O43683 1085 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 ADD2P35612 726 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 NAA25Q14CX7 972 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 MIS12Q9H081 205 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 VCX3BQ9H321 246 aa18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 ZNF215Q9UL58 517 aaPredicted RBP18.14■□□□□ 0.49
PCDHA1-203ENST00000504120 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 ARMCX5Q6P1M9 558 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 ZNF589Q86UQ0 364 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 SMCR8Q8TEV9 937 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 AMNQ9BXJ7 453 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 HOMER3Q9NSC5 361 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 BZW2Q9Y6E2 419 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 STX2P32856 288 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 PHBP35232 272 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 SARNPP82979 210 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 PPP2R5DQ14738 602 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 ANKRD20A3Q5VUR7 823 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 GDAP1L1Q96MZ0 367 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 RIOK1Q9BRS2 568 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 PFDN4Q9NQP4 134 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 ST7Q9NRC1 585 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 SLC5A4Q9NY91 659 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 EEF1GP26641 437 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 YARSP54577 528 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 ABCB5Q2M3G0 1257 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 CNKSR1Q969H4 720 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 DHTKD1Q96HY7 919 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 RABGAP1Q9Y3P9 1069 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 DMP1Q13316 513 aaPredicted RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 DOK7Q18PE1 504 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 CNOT6LQ96LI5 555 aaKnown RBP18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 NACA2Q9H009 215 aa18.13■□□□□ 0.49
PCDHA1-203ENST00000504120 PALM2Q8IXS6 379 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 TUBGCP2Q9BSJ2 902 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 TCP10L2B9ZVM9 353 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 BUB1BO60566 1050 aaPredicted RBP18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 TSNAXIP1Q2TAA8 658 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 TSC1Q92574 1164 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 hCG_1984214I3L0E3 225 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 EXOC3L4Q17RC7 722 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 PNMA8AQ86V59 439 aaPredicted RBP18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 ZNF713Q8N859 430 aaPredicted RBP18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 ASAP1Q9ULH1 1129 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 STAM2O75886 525 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 ADCY8P40145 1251 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 SLC17A8Q8NDX2 589 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 LARP4BQ92615 738 aaKnown RBP18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 KRT12Q99456 494 aa18.12■□□□□ 0.49
PCDHA1-203ENST00000504120 RASSF2P50749 326 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 TMC4Q7Z404 712 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 NLGN1Q8N2Q7 840 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 METTL13Q8N6R0 699 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 TYW1Q9NV66 732 aaKnown RBP18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 IFNB1P01574 187 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 TROVE2P10155 538 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 SOS2Q07890 1332 aaPredicted RBP18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 SLC12A2P55011 1212 aa18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 KIF23Q02241 960 aaPredicted RBP18.11■□□□□ 0.49
PCDHA1-203ENST00000504120 KRT81Q14533 505 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms