RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 KLRC4O43908 158 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 ERLIN1O75477 346 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 NPM3O75607 178 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 UFL1O94874 794 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 IPO7O95373 1038 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 SERPINB2P05120 415 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 SNHG28P0DPA3 235 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 GCFC2P16383 781 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 CASP14P31944 242 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 KRT9P35527 623 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 CYLC1P35663 651 aaPredicted RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 BTDP43251 543 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 FXR1P51114 621 aaKnown RBP eCLIP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 CLCN6P51797 869 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 MRPL12P52815 198 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 NAPAP54920 295 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 STX17P56962 302 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 RHBDL3P58872 404 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 FKBP1AP62942 108 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 GPSM2P81274 684 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 UBXN1Q04323 297 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 LRRC63Q05C16 580 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TRAF1Q13077 416 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 GPS2Q13227 327 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 NAA30Q147X3 362 aaPredicted RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 KARSQ15046 597 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 MEA1Q16626 185 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TMEM266Q2M3C6 531 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 NAALADL2Q58DX5 795 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 NOM1Q5C9Z4 860 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TEX35Q5T0J7 233 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 GPATCH4Q5T3I0 446 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 PPP4R3AQ6IN85 833 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 PRR5LQ6MZQ0 368 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TTI2Q6NXR4 508 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 RAD9BQ6WBX8 426 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TOGARAM2Q6ZUX3 1019 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 SV2BQ7L1I2 683 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 HEATR3Q7Z4Q2 680 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 IRF2BP1Q8IU81 584 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 ZSCAN29Q8IWY8 852 aaPredicted RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TEX11Q8IYF3 940 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 REXO1Q8N1G1 1221 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 STAG2Q8N3U4 1231 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 GUF1Q8N442 669 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 MSANTD4Q8NCY6 345 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 RASSF8Q8NHQ8 419 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 ZNF507Q8TCN5 953 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 P2RX5Q93086 422 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 KIFC2Q96AC6 838 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 GJD4Q96KN9 370 aaPredicted RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 CCDC17Q96LX7 622 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 C8orf37Q96NL8 207 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 MTMR9Q96QG7 549 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 ERGIC2Q96RQ1 377 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 NUP88Q99567 741 aaPredicted RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 DNAJC7Q99615 494 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TUBGCP2Q9BSJ2 902 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TSGA10Q9BZW7 698 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 TRIM9Q9C026 710 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 COA1Q9GZY4 146 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 NUCKS1Q9H1E3 243 aaKnown RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 VPS16Q9H269 839 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 ARFGAP3Q9NP61 516 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 RIC8AQ9NPQ8 531 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 EXOC1Q9NV70 894 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 SYNPO2Q9UMS6 1093 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 EPN1Q9Y6I3 576 aaPredicted RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 V9GYY5 206 aaPredicted RBP4.36□□□□□ -1.71
ALYREF-201ENST00000504015 FLT1P17948 1338 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 UBR3Q6ZT12 1888 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 SNED1Q8TER0 1413 aa4.36□□□□□ -1.71
ALYREF-201ENST00000504015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 IGKV6D-41A0A0C4DH26 115 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 PNMA6FA0A0J9YX94 578 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ANO9A1A5B4 782 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 USP17L3A6NCW0 530 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 USP17L4A6NCW7 530 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 SOWAHDA6NJG2 315 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 EIF3CLB5ME19 914 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 PSMD14O00487 310 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 KRT86O43790 486 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 CCNT1O60563 726 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 EIF3JO75822 258 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 NDUFA10O95299 355 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 GNA14O95837 355 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 TTLL1O95922 423 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 PNMA6AP0CW24 399 aaPredicted RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 PDHBP11177 359 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 GYS1P13807 737 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 VEGFAP15692 232 aaPredicted RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 PRLRP16471 622 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 CASP1P29466 404 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ALDH1B1P30837 517 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 HNRNPH3P31942 346 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ADCY7P51828 1080 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 CHMP4BP1P59074 171 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 ZBED6P86452 979 aa4.35□□□□□ -1.71
ALYREF-201ENST00000504015 HDLBPQ00341 1268 aaKnown RBP4.35□□□□□ -1.71
ALYREF-201ENST00000504015 GABPAQ06546 454 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms